Gene : Medtr2g038090 M. truncatula Mt4.0v1
Description:  4/1 protein short form protein Genomic Order:  2292
Name:  ? Medtr2g038090 Secondary Identifier:  ? PAC:31062862
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g038090 0.5kb upstream 0.5kb upstream 2637 true chr2: 16556733-16559369 Medicago truncatula
Medtr2g038090 0.5kb upstream 0.5kb upstream 500 false chr2: 16556733-16557232 Medicago truncatula
Medtr2g038090 0.5kb downstream 0.5kb downstream 2637 true chr2: 16557233-16559869 Medicago truncatula
Medtr2g038090 0.5kb downstream 0.5kb downstream 500 false chr2: 16559370-16559869 Medicago truncatula
Medtr2g038090 1.0kb upstream 1.0kb upstream 3137 true chr2: 16556233-16559369 Medicago truncatula
Medtr2g038090 1.0kb upstream 1.0kb upstream 1000 false chr2: 16556233-16557232 Medicago truncatula
Medtr2g038090 1.0kb downstream 1.0kb downstream 3137 true chr2: 16557233-16560369 Medicago truncatula
Medtr2g038090 1.0kb downstream 1.0kb downstream 1000 false chr2: 16559370-16560369 Medicago truncatula
Medtr2g038090 2.0kb upstream 2.0kb upstream 4137 true chr2: 16555233-16559369 Medicago truncatula
Medtr2g038090 2.0kb upstream 2.0kb upstream 2000 false chr2: 16555233-16557232 Medicago truncatula
Medtr2g038090 2.0kb downstream 2.0kb downstream 4137 true chr2: 16557233-16561369 Medicago truncatula
Medtr2g038090 2.0kb downstream 2.0kb downstream 2000 false chr2: 16559370-16561369 Medicago truncatula
Medtr2g038090 5.0kb upstream 5.0kb upstream 7137 true chr2: 16552233-16559369 Medicago truncatula
Medtr2g038090 5.0kb upstream 5.0kb upstream 5000 false chr2: 16552233-16557232 Medicago truncatula
Medtr2g038090 5.0kb downstream 5.0kb downstream 7137 true chr2: 16557233-16564369 Medicago truncatula
Medtr2g038090 5.0kb downstream 5.0kb downstream 5000 false chr2: 16559370-16564369 Medicago truncatula
Medtr2g038090 10.0kb upstream 10.0kb upstream 12137 true chr2: 16547233-16559369 Medicago truncatula
Medtr2g038090 10.0kb upstream 10.0kb upstream 10000 false chr2: 16547233-16557232 Medicago truncatula
Medtr2g038090 10.0kb downstream 10.0kb downstream 12137 true chr2: 16557233-16569369 Medicago truncatula
Medtr2g038090 10.0kb downstream 10.0kb downstream 10000 false chr2: 16559370-16569369 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026252 5273 Angiosperm View MSA
122303580 5265 Fabidae View MSA
124062851 5270 Rosid View MSA
123741515 5271 Pentapetalae View MSA
122796555 5272 Eudicot View MSA
121296245 5274 Embryophyte View MSA
123334442 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.221        
cufflinks 0.319       High
cufflinks 0.172       Low
cufflinks 0.212        
cufflinks 0.275        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.246        
cufflinks 0.222        
cufflinks 0.204        

0 Strain