Gene : Medtr2g037930 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22957:SF28 - TBC1 DOMAIN FAMILY MEMBER 5 Description:  Ypt/Rab-GAP domain of gyp1p superfamily protein
Genomic Order:  2280 Name:  ? Medtr2g037930
Secondary Identifier:  ? PAC:31065205
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g037930 0.5kb upstream 0.5kb upstream 5594 true chr2: 16449705-16455298 Medicago truncatula
Medtr2g037930 0.5kb upstream 0.5kb upstream 500 false chr2: 16449705-16450204 Medicago truncatula
Medtr2g037930 0.5kb downstream 0.5kb downstream 5594 true chr2: 16450205-16455798 Medicago truncatula
Medtr2g037930 0.5kb downstream 0.5kb downstream 500 false chr2: 16455299-16455798 Medicago truncatula
Medtr2g037930 1.0kb upstream 1.0kb upstream 6094 true chr2: 16449205-16455298 Medicago truncatula
Medtr2g037930 1.0kb upstream 1.0kb upstream 1000 false chr2: 16449205-16450204 Medicago truncatula
Medtr2g037930 1.0kb downstream 1.0kb downstream 6094 true chr2: 16450205-16456298 Medicago truncatula
Medtr2g037930 1.0kb downstream 1.0kb downstream 1000 false chr2: 16455299-16456298 Medicago truncatula
Medtr2g037930 2.0kb upstream 2.0kb upstream 7094 true chr2: 16448205-16455298 Medicago truncatula
Medtr2g037930 2.0kb upstream 2.0kb upstream 2000 false chr2: 16448205-16450204 Medicago truncatula
Medtr2g037930 2.0kb downstream 2.0kb downstream 7094 true chr2: 16450205-16457298 Medicago truncatula
Medtr2g037930 2.0kb downstream 2.0kb downstream 2000 false chr2: 16455299-16457298 Medicago truncatula
Medtr2g037930 5.0kb upstream 5.0kb upstream 10094 true chr2: 16445205-16455298 Medicago truncatula
Medtr2g037930 5.0kb upstream 5.0kb upstream 5000 false chr2: 16445205-16450204 Medicago truncatula
Medtr2g037930 5.0kb downstream 5.0kb downstream 10094 true chr2: 16450205-16460298 Medicago truncatula
Medtr2g037930 5.0kb downstream 5.0kb downstream 5000 false chr2: 16455299-16460298 Medicago truncatula
Medtr2g037930 10.0kb upstream 10.0kb upstream 15094 true chr2: 16440205-16455298 Medicago truncatula
Medtr2g037930 10.0kb upstream 10.0kb upstream 10000 false chr2: 16440205-16450204 Medicago truncatula
Medtr2g037930 10.0kb downstream 10.0kb downstream 15094 true chr2: 16450205-16465298 Medicago truncatula
Medtr2g037930 10.0kb downstream 10.0kb downstream 10000 false chr2: 16455299-16465298 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314968 5265 Fabidae View MSA
124063811 5270 Rosid View MSA
123743864 5271 Pentapetalae View MSA
122788044 5272 Eudicot View MSA
122042280 5273 Angiosperm View MSA
121350721 5274 Embryophyte View MSA
123428432 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.963     High High
cufflinks 38.502     High  
cufflinks 29.394     High  
cufflinks 17.602     High Low
cufflinks 26.65     High  
cufflinks 14.229     High Low
cufflinks 33.203     High  
cufflinks 42.492     High  
cufflinks 36.49     High  

0 Strain