Gene : Medtr2g039670 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG Description:  DNA repair and recombination protein
Genomic Order:  2387 Name:  ? Medtr2g039670
Secondary Identifier:  ? PAC:31066156
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g039670 0.5kb upstream 0.5kb upstream 8931 true chr2: 17378929-17387859 Medicago truncatula
Medtr2g039670 0.5kb upstream 0.5kb upstream 500 false chr2: 17387360-17387859 Medicago truncatula
Medtr2g039670 0.5kb downstream 0.5kb downstream 8931 true chr2: 17378429-17387359 Medicago truncatula
Medtr2g039670 0.5kb downstream 0.5kb downstream 500 false chr2: 17378429-17378928 Medicago truncatula
Medtr2g039670 1.0kb upstream 1.0kb upstream 9431 true chr2: 17378929-17388359 Medicago truncatula
Medtr2g039670 1.0kb upstream 1.0kb upstream 1000 false chr2: 17387360-17388359 Medicago truncatula
Medtr2g039670 1.0kb downstream 1.0kb downstream 9431 true chr2: 17377929-17387359 Medicago truncatula
Medtr2g039670 1.0kb downstream 1.0kb downstream 1000 false chr2: 17377929-17378928 Medicago truncatula
Medtr2g039670 2.0kb upstream 2.0kb upstream 10431 true chr2: 17378929-17389359 Medicago truncatula
Medtr2g039670 2.0kb upstream 2.0kb upstream 2000 false chr2: 17387360-17389359 Medicago truncatula
Medtr2g039670 2.0kb downstream 2.0kb downstream 10431 true chr2: 17376929-17387359 Medicago truncatula
Medtr2g039670 2.0kb downstream 2.0kb downstream 2000 false chr2: 17376929-17378928 Medicago truncatula
Medtr2g039670 5.0kb upstream 5.0kb upstream 13431 true chr2: 17378929-17392359 Medicago truncatula
Medtr2g039670 5.0kb upstream 5.0kb upstream 5000 false chr2: 17387360-17392359 Medicago truncatula
Medtr2g039670 5.0kb downstream 5.0kb downstream 13431 true chr2: 17373929-17387359 Medicago truncatula
Medtr2g039670 5.0kb downstream 5.0kb downstream 5000 false chr2: 17373929-17378928 Medicago truncatula
Medtr2g039670 10.0kb upstream 10.0kb upstream 18431 true chr2: 17378929-17397359 Medicago truncatula
Medtr2g039670 10.0kb upstream 10.0kb upstream 10000 false chr2: 17387360-17397359 Medicago truncatula
Medtr2g039670 10.0kb downstream 10.0kb downstream 18431 true chr2: 17368929-17387359 Medicago truncatula
Medtr2g039670 10.0kb downstream 10.0kb downstream 10000 false chr2: 17368929-17378928 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297351 5265 Fabidae View MSA
124060910 5270 Rosid View MSA
123743404 5271 Pentapetalae View MSA
122790818 5272 Eudicot View MSA
122045748 5273 Angiosperm View MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.106        
cufflinks 0.144        
cufflinks 0.206        
cufflinks 0.185        
cufflinks 0.134        
cufflinks 0.072     Low Low
cufflinks 0.316       High
cufflinks 0.122        
cufflinks 0.399       High

0 Strain