Gene : Medtr2g039250 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22850//PTHR22850:SF105 - WD40 REPEAT FAMILY Description:  nucleosome/chromatin assembly factor group protein
Genomic Order:  2363 Name:  ? Medtr2g039250
Secondary Identifier:  ? PAC:31063357
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g039250 0.5kb upstream 0.5kb upstream 7807 true chr2: 17189459-17197265 Medicago truncatula
Medtr2g039250 0.5kb upstream 0.5kb upstream 500 false chr2: 17196766-17197265 Medicago truncatula
Medtr2g039250 0.5kb downstream 0.5kb downstream 7807 true chr2: 17188959-17196765 Medicago truncatula
Medtr2g039250 0.5kb downstream 0.5kb downstream 500 false chr2: 17188959-17189458 Medicago truncatula
Medtr2g039250 1.0kb upstream 1.0kb upstream 8307 true chr2: 17189459-17197765 Medicago truncatula
Medtr2g039250 1.0kb upstream 1.0kb upstream 1000 false chr2: 17196766-17197765 Medicago truncatula
Medtr2g039250 1.0kb downstream 1.0kb downstream 8307 true chr2: 17188459-17196765 Medicago truncatula
Medtr2g039250 1.0kb downstream 1.0kb downstream 1000 false chr2: 17188459-17189458 Medicago truncatula
Medtr2g039250 2.0kb upstream 2.0kb upstream 9307 true chr2: 17189459-17198765 Medicago truncatula
Medtr2g039250 2.0kb upstream 2.0kb upstream 2000 false chr2: 17196766-17198765 Medicago truncatula
Medtr2g039250 2.0kb downstream 2.0kb downstream 9307 true chr2: 17187459-17196765 Medicago truncatula
Medtr2g039250 2.0kb downstream 2.0kb downstream 2000 false chr2: 17187459-17189458 Medicago truncatula
Medtr2g039250 5.0kb upstream 5.0kb upstream 12307 true chr2: 17189459-17201765 Medicago truncatula
Medtr2g039250 5.0kb upstream 5.0kb upstream 5000 false chr2: 17196766-17201765 Medicago truncatula
Medtr2g039250 5.0kb downstream 5.0kb downstream 12307 true chr2: 17184459-17196765 Medicago truncatula
Medtr2g039250 5.0kb downstream 5.0kb downstream 5000 false chr2: 17184459-17189458 Medicago truncatula
Medtr2g039250 10.0kb upstream 10.0kb upstream 17307 true chr2: 17189459-17206765 Medicago truncatula
Medtr2g039250 10.0kb upstream 10.0kb upstream 10000 false chr2: 17196766-17206765 Medicago truncatula
Medtr2g039250 10.0kb downstream 10.0kb downstream 17307 true chr2: 17179459-17196765 Medicago truncatula
Medtr2g039250 10.0kb downstream 10.0kb downstream 10000 false chr2: 17179459-17189458 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041058 5273 Angiosperm View MSA
122303424 5265 Fabidae View MSA
124070712 5270 Rosid View MSA
123743573 5271 Pentapetalae View MSA
122790330 5272 Eudicot View MSA
121347488 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.25     High High
cufflinks 3.232        
cufflinks 2.66        
cufflinks 2.781        
cufflinks 4.96        
cufflinks 1.63       Low
cufflinks 4.592        
cufflinks 2.676        
cufflinks 8.835       High

0 Strain