Gene : Medtr2g038720 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10071//PTHR10071:SF191 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR Description:  GATA type zinc finger transcription factor family protein
Genomic Order:  2339 Name:  ? Medtr2g038720
Secondary Identifier:  ? PAC:31065850
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g038720 0.5kb upstream 0.5kb upstream 2196 true chr2: 16953838-16956033 Medicago truncatula
Medtr2g038720 0.5kb upstream 0.5kb upstream 500 false chr2: 16955534-16956033 Medicago truncatula
Medtr2g038720 0.5kb downstream 0.5kb downstream 2196 true chr2: 16953338-16955533 Medicago truncatula
Medtr2g038720 0.5kb downstream 0.5kb downstream 500 false chr2: 16953338-16953837 Medicago truncatula
Medtr2g038720 1.0kb upstream 1.0kb upstream 2696 true chr2: 16953838-16956533 Medicago truncatula
Medtr2g038720 1.0kb upstream 1.0kb upstream 1000 false chr2: 16955534-16956533 Medicago truncatula
Medtr2g038720 1.0kb downstream 1.0kb downstream 2696 true chr2: 16952838-16955533 Medicago truncatula
Medtr2g038720 1.0kb downstream 1.0kb downstream 1000 false chr2: 16952838-16953837 Medicago truncatula
Medtr2g038720 2.0kb upstream 2.0kb upstream 3696 true chr2: 16953838-16957533 Medicago truncatula
Medtr2g038720 2.0kb upstream 2.0kb upstream 2000 false chr2: 16955534-16957533 Medicago truncatula
Medtr2g038720 2.0kb downstream 2.0kb downstream 3696 true chr2: 16951838-16955533 Medicago truncatula
Medtr2g038720 2.0kb downstream 2.0kb downstream 2000 false chr2: 16951838-16953837 Medicago truncatula
Medtr2g038720 5.0kb upstream 5.0kb upstream 6696 true chr2: 16953838-16960533 Medicago truncatula
Medtr2g038720 5.0kb upstream 5.0kb upstream 5000 false chr2: 16955534-16960533 Medicago truncatula
Medtr2g038720 5.0kb downstream 5.0kb downstream 6696 true chr2: 16948838-16955533 Medicago truncatula
Medtr2g038720 5.0kb downstream 5.0kb downstream 5000 false chr2: 16948838-16953837 Medicago truncatula
Medtr2g038720 10.0kb upstream 10.0kb upstream 11696 true chr2: 16953838-16965533 Medicago truncatula
Medtr2g038720 10.0kb upstream 10.0kb upstream 10000 false chr2: 16955534-16965533 Medicago truncatula
Medtr2g038720 10.0kb downstream 10.0kb downstream 11696 true chr2: 16943838-16955533 Medicago truncatula
Medtr2g038720 10.0kb downstream 10.0kb downstream 10000 false chr2: 16943838-16953837 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296650 5265 Fabidae View MSA
124071935 5270 Rosid View MSA
123749447 5271 Pentapetalae View MSA
122796147 5272 Eudicot View MSA
122045626 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013     Low Low
cufflinks 3.438        
cufflinks 2.388        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.836        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.294        
cufflinks 0.018     Low Low

0 Strain