Gene : Medtr2g040150 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR24356:SF206 - AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN Description:  AGC kinase
Genomic Order:  2425 Name:  ? Medtr2g040150
Secondary Identifier:  ? PAC:31064641
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g040150 0.5kb upstream 0.5kb upstream 5898 true chr2: 17607791-17613688 Medicago truncatula
Medtr2g040150 0.5kb upstream 0.5kb upstream 500 false chr2: 17607791-17608290 Medicago truncatula
Medtr2g040150 0.5kb downstream 0.5kb downstream 5898 true chr2: 17608291-17614188 Medicago truncatula
Medtr2g040150 0.5kb downstream 0.5kb downstream 500 false chr2: 17613689-17614188 Medicago truncatula
Medtr2g040150 1.0kb upstream 1.0kb upstream 6398 true chr2: 17607291-17613688 Medicago truncatula
Medtr2g040150 1.0kb upstream 1.0kb upstream 1000 false chr2: 17607291-17608290 Medicago truncatula
Medtr2g040150 1.0kb downstream 1.0kb downstream 6398 true chr2: 17608291-17614688 Medicago truncatula
Medtr2g040150 1.0kb downstream 1.0kb downstream 1000 false chr2: 17613689-17614688 Medicago truncatula
Medtr2g040150 2.0kb upstream 2.0kb upstream 7398 true chr2: 17606291-17613688 Medicago truncatula
Medtr2g040150 2.0kb upstream 2.0kb upstream 2000 false chr2: 17606291-17608290 Medicago truncatula
Medtr2g040150 2.0kb downstream 2.0kb downstream 7398 true chr2: 17608291-17615688 Medicago truncatula
Medtr2g040150 2.0kb downstream 2.0kb downstream 2000 false chr2: 17613689-17615688 Medicago truncatula
Medtr2g040150 5.0kb upstream 5.0kb upstream 10398 true chr2: 17603291-17613688 Medicago truncatula
Medtr2g040150 5.0kb upstream 5.0kb upstream 5000 false chr2: 17603291-17608290 Medicago truncatula
Medtr2g040150 5.0kb downstream 5.0kb downstream 10398 true chr2: 17608291-17618688 Medicago truncatula
Medtr2g040150 5.0kb downstream 5.0kb downstream 5000 false chr2: 17613689-17618688 Medicago truncatula
Medtr2g040150 10.0kb upstream 10.0kb upstream 15398 true chr2: 17598291-17613688 Medicago truncatula
Medtr2g040150 10.0kb upstream 10.0kb upstream 10000 false chr2: 17598291-17608290 Medicago truncatula
Medtr2g040150 10.0kb downstream 10.0kb downstream 15398 true chr2: 17608291-17623688 Medicago truncatula
Medtr2g040150 10.0kb downstream 10.0kb downstream 10000 false chr2: 17613689-17623688 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041161 5273 Angiosperm View MSA
122310309 5265 Fabidae View MSA
124060430 5270 Rosid View MSA
123736636 5271 Pentapetalae View MSA
122791163 5272 Eudicot View MSA
121348610 5274 Embryophyte View MSA
123428649 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.112        
cufflinks 0.164       High
cufflinks 0.068     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.095        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low Low
cufflinks 0.081        
cufflinks 0.063     Low  

0 Strain