Gene : Medtr2g041260 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR34455:SF1 - EXPRESSED PROTEIN Description:  ultraviolet-B-repressible protein
Genomic Order:  2491 Name:  ? Medtr2g041260
Secondary Identifier:  ? PAC:31065349
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g041260 0.5kb upstream 0.5kb upstream 1631 true chr2: 18098933-18100563 Medicago truncatula
Medtr2g041260 0.5kb upstream 0.5kb upstream 500 false chr2: 18098933-18099432 Medicago truncatula
Medtr2g041260 0.5kb downstream 0.5kb downstream 1631 true chr2: 18099433-18101063 Medicago truncatula
Medtr2g041260 0.5kb downstream 0.5kb downstream 500 false chr2: 18100564-18101063 Medicago truncatula
Medtr2g041260 1.0kb upstream 1.0kb upstream 2131 true chr2: 18098433-18100563 Medicago truncatula
Medtr2g041260 1.0kb upstream 1.0kb upstream 1000 false chr2: 18098433-18099432 Medicago truncatula
Medtr2g041260 1.0kb downstream 1.0kb downstream 2131 true chr2: 18099433-18101563 Medicago truncatula
Medtr2g041260 1.0kb downstream 1.0kb downstream 1000 false chr2: 18100564-18101563 Medicago truncatula
Medtr2g041260 2.0kb upstream 2.0kb upstream 3131 true chr2: 18097433-18100563 Medicago truncatula
Medtr2g041260 2.0kb upstream 2.0kb upstream 2000 false chr2: 18097433-18099432 Medicago truncatula
Medtr2g041260 2.0kb downstream 2.0kb downstream 3131 true chr2: 18099433-18102563 Medicago truncatula
Medtr2g041260 2.0kb downstream 2.0kb downstream 2000 false chr2: 18100564-18102563 Medicago truncatula
Medtr2g041260 5.0kb upstream 5.0kb upstream 6131 true chr2: 18094433-18100563 Medicago truncatula
Medtr2g041260 5.0kb upstream 5.0kb upstream 5000 false chr2: 18094433-18099432 Medicago truncatula
Medtr2g041260 5.0kb downstream 5.0kb downstream 6131 true chr2: 18099433-18105563 Medicago truncatula
Medtr2g041260 5.0kb downstream 5.0kb downstream 5000 false chr2: 18100564-18105563 Medicago truncatula
Medtr2g041260 10.0kb upstream 10.0kb upstream 11131 true chr2: 18089433-18100563 Medicago truncatula
Medtr2g041260 10.0kb upstream 10.0kb upstream 10000 false chr2: 18089433-18099432 Medicago truncatula
Medtr2g041260 10.0kb downstream 10.0kb downstream 11131 true chr2: 18099433-18110563 Medicago truncatula
Medtr2g041260 10.0kb downstream 10.0kb downstream 10000 false chr2: 18100564-18110563 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300070 5265 Fabidae View MSA
124072175 5270 Rosid View MSA
123739685 5271 Pentapetalae View MSA
122793757 5272 Eudicot View MSA
122041544 5273 Angiosperm View MSA
121346235 5274 Embryophyte View MSA
123428099 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 23.434     High  
cufflinks 18.627     High  
cufflinks 0.06     Low  
cufflinks 30.643     High  
cufflinks 0.054     Low  
cufflinks 0.012     Low Low
cufflinks 26.602     High  
cufflinks 0.027     Low  

0 Strain