Gene : Medtr2g041220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED Description:  mechanosensitive ion channel family protein
Genomic Order:  2489 Name:  ? Medtr2g041220
Secondary Identifier:  ? PAC:31064545
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g041220 0.5kb upstream 0.5kb upstream 4034 true chr2: 18078414-18082447 Medicago truncatula
Medtr2g041220 0.5kb upstream 0.5kb upstream 500 false chr2: 18078414-18078913 Medicago truncatula
Medtr2g041220 0.5kb downstream 0.5kb downstream 4034 true chr2: 18078914-18082947 Medicago truncatula
Medtr2g041220 0.5kb downstream 0.5kb downstream 500 false chr2: 18082448-18082947 Medicago truncatula
Medtr2g041220 1.0kb upstream 1.0kb upstream 4534 true chr2: 18077914-18082447 Medicago truncatula
Medtr2g041220 1.0kb upstream 1.0kb upstream 1000 false chr2: 18077914-18078913 Medicago truncatula
Medtr2g041220 1.0kb downstream 1.0kb downstream 4534 true chr2: 18078914-18083447 Medicago truncatula
Medtr2g041220 1.0kb downstream 1.0kb downstream 1000 false chr2: 18082448-18083447 Medicago truncatula
Medtr2g041220 2.0kb upstream 2.0kb upstream 5534 true chr2: 18076914-18082447 Medicago truncatula
Medtr2g041220 2.0kb upstream 2.0kb upstream 2000 false chr2: 18076914-18078913 Medicago truncatula
Medtr2g041220 2.0kb downstream 2.0kb downstream 5534 true chr2: 18078914-18084447 Medicago truncatula
Medtr2g041220 2.0kb downstream 2.0kb downstream 2000 false chr2: 18082448-18084447 Medicago truncatula
Medtr2g041220 5.0kb upstream 5.0kb upstream 8534 true chr2: 18073914-18082447 Medicago truncatula
Medtr2g041220 5.0kb upstream 5.0kb upstream 5000 false chr2: 18073914-18078913 Medicago truncatula
Medtr2g041220 5.0kb downstream 5.0kb downstream 8534 true chr2: 18078914-18087447 Medicago truncatula
Medtr2g041220 5.0kb downstream 5.0kb downstream 5000 false chr2: 18082448-18087447 Medicago truncatula
Medtr2g041220 10.0kb upstream 10.0kb upstream 13534 true chr2: 18068914-18082447 Medicago truncatula
Medtr2g041220 10.0kb upstream 10.0kb upstream 10000 false chr2: 18068914-18078913 Medicago truncatula
Medtr2g041220 10.0kb downstream 10.0kb downstream 13534 true chr2: 18078914-18092447 Medicago truncatula
Medtr2g041220 10.0kb downstream 10.0kb downstream 10000 false chr2: 18082448-18092447 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122304321 5265 Fabidae View MSA
124069991 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.692        
cufflinks 1.747        
cufflinks 3.002       High
cufflinks 0.206       Low
cufflinks 3.005       High
cufflinks 0.391        
cufflinks 0.296        
cufflinks 2.561        
cufflinks 0.117       Low

0 Strain