Gene : Medtr2g028220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Description:  DUF566 family protein
Genomic Order:  1483 Name:  ? Medtr2g028220
Secondary Identifier:  ? PAC:31064523
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g028220 0.5kb upstream 0.5kb upstream 4730 true chr2: 10394602-10399331 Medicago truncatula
Medtr2g028220 0.5kb upstream 0.5kb upstream 500 false chr2: 10398832-10399331 Medicago truncatula
Medtr2g028220 0.5kb downstream 0.5kb downstream 4730 true chr2: 10394102-10398831 Medicago truncatula
Medtr2g028220 0.5kb downstream 0.5kb downstream 500 false chr2: 10394102-10394601 Medicago truncatula
Medtr2g028220 1.0kb upstream 1.0kb upstream 5230 true chr2: 10394602-10399831 Medicago truncatula
Medtr2g028220 1.0kb upstream 1.0kb upstream 1000 false chr2: 10398832-10399831 Medicago truncatula
Medtr2g028220 1.0kb downstream 1.0kb downstream 5230 true chr2: 10393602-10398831 Medicago truncatula
Medtr2g028220 1.0kb downstream 1.0kb downstream 1000 false chr2: 10393602-10394601 Medicago truncatula
Medtr2g028220 2.0kb upstream 2.0kb upstream 6230 true chr2: 10394602-10400831 Medicago truncatula
Medtr2g028220 2.0kb upstream 2.0kb upstream 2000 false chr2: 10398832-10400831 Medicago truncatula
Medtr2g028220 2.0kb downstream 2.0kb downstream 6230 true chr2: 10392602-10398831 Medicago truncatula
Medtr2g028220 2.0kb downstream 2.0kb downstream 2000 false chr2: 10392602-10394601 Medicago truncatula
Medtr2g028220 5.0kb upstream 5.0kb upstream 9230 true chr2: 10394602-10403831 Medicago truncatula
Medtr2g028220 5.0kb upstream 5.0kb upstream 5000 false chr2: 10398832-10403831 Medicago truncatula
Medtr2g028220 5.0kb downstream 5.0kb downstream 9230 true chr2: 10389602-10398831 Medicago truncatula
Medtr2g028220 5.0kb downstream 5.0kb downstream 5000 false chr2: 10389602-10394601 Medicago truncatula
Medtr2g028220 10.0kb upstream 10.0kb upstream 14230 true chr2: 10394602-10408831 Medicago truncatula
Medtr2g028220 10.0kb upstream 10.0kb upstream 10000 false chr2: 10398832-10408831 Medicago truncatula
Medtr2g028220 10.0kb downstream 10.0kb downstream 14230 true chr2: 10384602-10398831 Medicago truncatula
Medtr2g028220 10.0kb downstream 10.0kb downstream 10000 false chr2: 10384602-10394601 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309438 5265 Fabidae View MSA
124067070 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.188        
cufflinks 0.353        
cufflinks 0.649       High
cufflinks 0.067     Low Low
cufflinks 0.419        
cufflinks 0.072     Low Low
cufflinks 0.231        
cufflinks 0.438        
cufflinks 0.311        

0 Strain