Gene : Medtr2g028050 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN Description:  transducin/WD40 repeat protein
Genomic Order:  1470 Name:  ? Medtr2g028050
Secondary Identifier:  ? PAC:31066161
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g028050 0.5kb upstream 0.5kb upstream 7173 true chr2: 10317586-10324758 Medicago truncatula
Medtr2g028050 0.5kb upstream 0.5kb upstream 500 false chr2: 10317586-10318085 Medicago truncatula
Medtr2g028050 0.5kb downstream 0.5kb downstream 7173 true chr2: 10318086-10325258 Medicago truncatula
Medtr2g028050 0.5kb downstream 0.5kb downstream 500 false chr2: 10324759-10325258 Medicago truncatula
Medtr2g028050 1.0kb upstream 1.0kb upstream 7673 true chr2: 10317086-10324758 Medicago truncatula
Medtr2g028050 1.0kb upstream 1.0kb upstream 1000 false chr2: 10317086-10318085 Medicago truncatula
Medtr2g028050 1.0kb downstream 1.0kb downstream 7673 true chr2: 10318086-10325758 Medicago truncatula
Medtr2g028050 1.0kb downstream 1.0kb downstream 1000 false chr2: 10324759-10325758 Medicago truncatula
Medtr2g028050 2.0kb upstream 2.0kb upstream 8673 true chr2: 10316086-10324758 Medicago truncatula
Medtr2g028050 2.0kb upstream 2.0kb upstream 2000 false chr2: 10316086-10318085 Medicago truncatula
Medtr2g028050 2.0kb downstream 2.0kb downstream 8673 true chr2: 10318086-10326758 Medicago truncatula
Medtr2g028050 2.0kb downstream 2.0kb downstream 2000 false chr2: 10324759-10326758 Medicago truncatula
Medtr2g028050 5.0kb upstream 5.0kb upstream 11673 true chr2: 10313086-10324758 Medicago truncatula
Medtr2g028050 5.0kb upstream 5.0kb upstream 5000 false chr2: 10313086-10318085 Medicago truncatula
Medtr2g028050 5.0kb downstream 5.0kb downstream 11673 true chr2: 10318086-10329758 Medicago truncatula
Medtr2g028050 5.0kb downstream 5.0kb downstream 5000 false chr2: 10324759-10329758 Medicago truncatula
Medtr2g028050 10.0kb upstream 10.0kb upstream 16673 true chr2: 10308086-10324758 Medicago truncatula
Medtr2g028050 10.0kb upstream 10.0kb upstream 10000 false chr2: 10308086-10318085 Medicago truncatula
Medtr2g028050 10.0kb downstream 10.0kb downstream 16673 true chr2: 10318086-10334758 Medicago truncatula
Medtr2g028050 10.0kb downstream 10.0kb downstream 10000 false chr2: 10324759-10334758 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122296360 5265 Fabidae View MSA
124065588 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.78     High  
cufflinks 10.793     High  
cufflinks 13.859     High High
cufflinks 6.426        
cufflinks 12.043     High  
cufflinks 4.714       Low
cufflinks 8.069        
cufflinks 11.766     High  
cufflinks 6.309        

0 Strain