Gene : Medtr2g028920 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Description:  UPF0392 RCOM-like protein
Genomic Order:  1531 Name:  ? Medtr2g028920
Secondary Identifier:  ? PAC:31067018
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g028920 0.5kb upstream 0.5kb upstream 2192 true chr2: 10759671-10761862 Medicago truncatula
Medtr2g028920 0.5kb upstream 0.5kb upstream 500 false chr2: 10759671-10760170 Medicago truncatula
Medtr2g028920 0.5kb downstream 0.5kb downstream 2192 true chr2: 10760171-10762362 Medicago truncatula
Medtr2g028920 0.5kb downstream 0.5kb downstream 500 false chr2: 10761863-10762362 Medicago truncatula
Medtr2g028920 1.0kb upstream 1.0kb upstream 2692 true chr2: 10759171-10761862 Medicago truncatula
Medtr2g028920 1.0kb upstream 1.0kb upstream 1000 false chr2: 10759171-10760170 Medicago truncatula
Medtr2g028920 1.0kb downstream 1.0kb downstream 2692 true chr2: 10760171-10762862 Medicago truncatula
Medtr2g028920 1.0kb downstream 1.0kb downstream 1000 false chr2: 10761863-10762862 Medicago truncatula
Medtr2g028920 2.0kb upstream 2.0kb upstream 3692 true chr2: 10758171-10761862 Medicago truncatula
Medtr2g028920 2.0kb upstream 2.0kb upstream 2000 false chr2: 10758171-10760170 Medicago truncatula
Medtr2g028920 2.0kb downstream 2.0kb downstream 3692 true chr2: 10760171-10763862 Medicago truncatula
Medtr2g028920 2.0kb downstream 2.0kb downstream 2000 false chr2: 10761863-10763862 Medicago truncatula
Medtr2g028920 5.0kb upstream 5.0kb upstream 6692 true chr2: 10755171-10761862 Medicago truncatula
Medtr2g028920 5.0kb upstream 5.0kb upstream 5000 false chr2: 10755171-10760170 Medicago truncatula
Medtr2g028920 5.0kb downstream 5.0kb downstream 6692 true chr2: 10760171-10766862 Medicago truncatula
Medtr2g028920 5.0kb downstream 5.0kb downstream 5000 false chr2: 10761863-10766862 Medicago truncatula
Medtr2g028920 10.0kb upstream 10.0kb upstream 11692 true chr2: 10750171-10761862 Medicago truncatula
Medtr2g028920 10.0kb upstream 10.0kb upstream 10000 false chr2: 10750171-10760170 Medicago truncatula
Medtr2g028920 10.0kb downstream 10.0kb downstream 11692 true chr2: 10760171-10771862 Medicago truncatula
Medtr2g028920 10.0kb downstream 10.0kb downstream 10000 false chr2: 10761863-10771862 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312486 5265 Fabidae View MSA
124069004 5270 Rosid View MSA
123739785 5271 Pentapetalae View MSA
122796988 5272 Eudicot View MSA
122047525 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain