Gene : Medtr2g030300 M. truncatula Mt4.0v1

Description:  WPP domain associated protein Genomic Order:  1606
Name:  ? Medtr2g030300 Secondary Identifier:  ? PAC:31062034

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g030300 0.5kb upstream 0.5kb upstream 7469 true chr2: 11367116-11374584 Medicago truncatula
Medtr2g030300 0.5kb upstream 0.5kb upstream 500 false chr2: 11367116-11367615 Medicago truncatula
Medtr2g030300 0.5kb downstream 0.5kb downstream 7469 true chr2: 11367616-11375084 Medicago truncatula
Medtr2g030300 0.5kb downstream 0.5kb downstream 500 false chr2: 11374585-11375084 Medicago truncatula
Medtr2g030300 1.0kb upstream 1.0kb upstream 7969 true chr2: 11366616-11374584 Medicago truncatula
Medtr2g030300 1.0kb upstream 1.0kb upstream 1000 false chr2: 11366616-11367615 Medicago truncatula
Medtr2g030300 1.0kb downstream 1.0kb downstream 7969 true chr2: 11367616-11375584 Medicago truncatula
Medtr2g030300 1.0kb downstream 1.0kb downstream 1000 false chr2: 11374585-11375584 Medicago truncatula
Medtr2g030300 2.0kb upstream 2.0kb upstream 8969 true chr2: 11365616-11374584 Medicago truncatula
Medtr2g030300 2.0kb upstream 2.0kb upstream 2000 false chr2: 11365616-11367615 Medicago truncatula
Medtr2g030300 2.0kb downstream 2.0kb downstream 8969 true chr2: 11367616-11376584 Medicago truncatula
Medtr2g030300 2.0kb downstream 2.0kb downstream 2000 false chr2: 11374585-11376584 Medicago truncatula
Medtr2g030300 5.0kb upstream 5.0kb upstream 11969 true chr2: 11362616-11374584 Medicago truncatula
Medtr2g030300 5.0kb upstream 5.0kb upstream 5000 false chr2: 11362616-11367615 Medicago truncatula
Medtr2g030300 5.0kb downstream 5.0kb downstream 11969 true chr2: 11367616-11379584 Medicago truncatula
Medtr2g030300 5.0kb downstream 5.0kb downstream 5000 false chr2: 11374585-11379584 Medicago truncatula
Medtr2g030300 10.0kb upstream 10.0kb upstream 16969 true chr2: 11357616-11374584 Medicago truncatula
Medtr2g030300 10.0kb upstream 10.0kb upstream 10000 false chr2: 11357616-11367615 Medicago truncatula
Medtr2g030300 10.0kb downstream 10.0kb downstream 16969 true chr2: 11367616-11384584 Medicago truncatula
Medtr2g030300 10.0kb downstream 10.0kb downstream 10000 false chr2: 11374585-11384584 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041414 5273 Angiosperm View MSA
122303670 5265 Fabidae View MSA
124062664 5270 Rosid View MSA
123741176 5271 Pentapetalae View MSA
122787529 5272 Eudicot View MSA
121349870 5274 Embryophyte View MSA
123381480 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.902        
cufflinks 1.467        
cufflinks 2.39       High
cufflinks 0.383       Low
cufflinks 2.056       High
cufflinks 0.341       Low
cufflinks 0.56        
cufflinks 1.793        
cufflinks 0.5        

0 Strain