Gene : Medtr2g029340 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11649:SF65 - PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 2 Description:  ROOT HAIR defective 3 GTP-binding family protein
Genomic Order:  1557 Name:  ? Medtr2g029340
Secondary Identifier:  ? PAC:31068391
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g029340 0.5kb upstream 0.5kb upstream 12032 true chr2: 10951930-10963961 Medicago truncatula
Medtr2g029340 0.5kb upstream 0.5kb upstream 500 false chr2: 10951930-10952429 Medicago truncatula
Medtr2g029340 0.5kb downstream 0.5kb downstream 12032 true chr2: 10952430-10964461 Medicago truncatula
Medtr2g029340 0.5kb downstream 0.5kb downstream 500 false chr2: 10963962-10964461 Medicago truncatula
Medtr2g029340 1.0kb upstream 1.0kb upstream 12532 true chr2: 10951430-10963961 Medicago truncatula
Medtr2g029340 1.0kb upstream 1.0kb upstream 1000 false chr2: 10951430-10952429 Medicago truncatula
Medtr2g029340 1.0kb downstream 1.0kb downstream 12532 true chr2: 10952430-10964961 Medicago truncatula
Medtr2g029340 1.0kb downstream 1.0kb downstream 1000 false chr2: 10963962-10964961 Medicago truncatula
Medtr2g029340 2.0kb upstream 2.0kb upstream 13532 true chr2: 10950430-10963961 Medicago truncatula
Medtr2g029340 2.0kb upstream 2.0kb upstream 2000 false chr2: 10950430-10952429 Medicago truncatula
Medtr2g029340 2.0kb downstream 2.0kb downstream 13532 true chr2: 10952430-10965961 Medicago truncatula
Medtr2g029340 2.0kb downstream 2.0kb downstream 2000 false chr2: 10963962-10965961 Medicago truncatula
Medtr2g029340 5.0kb upstream 5.0kb upstream 16532 true chr2: 10947430-10963961 Medicago truncatula
Medtr2g029340 5.0kb upstream 5.0kb upstream 5000 false chr2: 10947430-10952429 Medicago truncatula
Medtr2g029340 5.0kb downstream 5.0kb downstream 16532 true chr2: 10952430-10968961 Medicago truncatula
Medtr2g029340 5.0kb downstream 5.0kb downstream 5000 false chr2: 10963962-10968961 Medicago truncatula
Medtr2g029340 10.0kb upstream 10.0kb upstream 21532 true chr2: 10942430-10963961 Medicago truncatula
Medtr2g029340 10.0kb upstream 10.0kb upstream 10000 false chr2: 10942430-10952429 Medicago truncatula
Medtr2g029340 10.0kb downstream 10.0kb downstream 21532 true chr2: 10952430-10973961 Medicago truncatula
Medtr2g029340 10.0kb downstream 10.0kb downstream 10000 false chr2: 10963962-10973961 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306891 5265 Fabidae View MSA
124037158 5270 Rosid View MSA
123749417 5271 Pentapetalae View MSA
122789407 5272 Eudicot View MSA
122048345 5273 Angiosperm View MSA
121345089 5274 Embryophyte View MSA
123427050 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.337        
cufflinks 5.066        
cufflinks 4.553        
cufflinks 2.512       Low
cufflinks 6.04       High
cufflinks 1.742       Low
cufflinks 3.6        
cufflinks 3.732        
cufflinks 6.383       High

0 Strain