Gene : Medtr2g033490 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21011//PTHR21011:SF4 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 Description:  30S ribosomal protein S6
Genomic Order:  1776 Name:  ? Medtr2g033490
Secondary Identifier:  ? PAC:31063749
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g033490 0.5kb upstream 0.5kb upstream 3464 true chr2: 12747419-12750882 Medicago truncatula
Medtr2g033490 0.5kb upstream 0.5kb upstream 500 false chr2: 12747419-12747918 Medicago truncatula
Medtr2g033490 0.5kb downstream 0.5kb downstream 3464 true chr2: 12747919-12751382 Medicago truncatula
Medtr2g033490 0.5kb downstream 0.5kb downstream 500 false chr2: 12750883-12751382 Medicago truncatula
Medtr2g033490 1.0kb upstream 1.0kb upstream 3964 true chr2: 12746919-12750882 Medicago truncatula
Medtr2g033490 1.0kb upstream 1.0kb upstream 1000 false chr2: 12746919-12747918 Medicago truncatula
Medtr2g033490 1.0kb downstream 1.0kb downstream 3964 true chr2: 12747919-12751882 Medicago truncatula
Medtr2g033490 1.0kb downstream 1.0kb downstream 1000 false chr2: 12750883-12751882 Medicago truncatula
Medtr2g033490 2.0kb upstream 2.0kb upstream 4964 true chr2: 12745919-12750882 Medicago truncatula
Medtr2g033490 2.0kb upstream 2.0kb upstream 2000 false chr2: 12745919-12747918 Medicago truncatula
Medtr2g033490 2.0kb downstream 2.0kb downstream 4964 true chr2: 12747919-12752882 Medicago truncatula
Medtr2g033490 2.0kb downstream 2.0kb downstream 2000 false chr2: 12750883-12752882 Medicago truncatula
Medtr2g033490 5.0kb upstream 5.0kb upstream 7964 true chr2: 12742919-12750882 Medicago truncatula
Medtr2g033490 5.0kb upstream 5.0kb upstream 5000 false chr2: 12742919-12747918 Medicago truncatula
Medtr2g033490 5.0kb downstream 5.0kb downstream 7964 true chr2: 12747919-12755882 Medicago truncatula
Medtr2g033490 5.0kb downstream 5.0kb downstream 5000 false chr2: 12750883-12755882 Medicago truncatula
Medtr2g033490 10.0kb upstream 10.0kb upstream 12964 true chr2: 12737919-12750882 Medicago truncatula
Medtr2g033490 10.0kb upstream 10.0kb upstream 10000 false chr2: 12737919-12747918 Medicago truncatula
Medtr2g033490 10.0kb downstream 10.0kb downstream 12964 true chr2: 12747919-12760882 Medicago truncatula
Medtr2g033490 10.0kb downstream 10.0kb downstream 10000 false chr2: 12750883-12760882 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299955 5265 Fabidae View MSA
124066561 5270 Rosid View MSA
123738958 5271 Pentapetalae View MSA
122791787 5272 Eudicot View MSA
122045597 5273 Angiosperm View MSA
121347704 5274 Embryophyte View MSA
123380604 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.946     High  
cufflinks 14.021     High  
cufflinks 20.355     High  
cufflinks 6.318       Low
cufflinks 25.05     High High
cufflinks 3.598       Low
cufflinks 13.554     High  
cufflinks 19.346     High  
cufflinks 9.097        

0 Strain