Gene : Medtr2g032740 M. truncatula Mt4.0v1

Description:  hypothetical protein Genomic Order:  1736
Name:  ? Medtr2g032740 Secondary Identifier:  ? PAC:31068486

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g032740 0.5kb upstream 0.5kb upstream 1538 true chr2: 12338630-12340167 Medicago truncatula
Medtr2g032740 0.5kb upstream 0.5kb upstream 500 false chr2: 12339668-12340167 Medicago truncatula
Medtr2g032740 0.5kb downstream 0.5kb downstream 1538 true chr2: 12338130-12339667 Medicago truncatula
Medtr2g032740 0.5kb downstream 0.5kb downstream 500 false chr2: 12338130-12338629 Medicago truncatula
Medtr2g032740 1.0kb upstream 1.0kb upstream 2038 true chr2: 12338630-12340667 Medicago truncatula
Medtr2g032740 1.0kb upstream 1.0kb upstream 1000 false chr2: 12339668-12340667 Medicago truncatula
Medtr2g032740 1.0kb downstream 1.0kb downstream 2038 true chr2: 12337630-12339667 Medicago truncatula
Medtr2g032740 1.0kb downstream 1.0kb downstream 1000 false chr2: 12337630-12338629 Medicago truncatula
Medtr2g032740 2.0kb upstream 2.0kb upstream 3038 true chr2: 12338630-12341667 Medicago truncatula
Medtr2g032740 2.0kb upstream 2.0kb upstream 2000 false chr2: 12339668-12341667 Medicago truncatula
Medtr2g032740 2.0kb downstream 2.0kb downstream 3038 true chr2: 12336630-12339667 Medicago truncatula
Medtr2g032740 2.0kb downstream 2.0kb downstream 2000 false chr2: 12336630-12338629 Medicago truncatula
Medtr2g032740 5.0kb upstream 5.0kb upstream 6038 true chr2: 12338630-12344667 Medicago truncatula
Medtr2g032740 5.0kb upstream 5.0kb upstream 5000 false chr2: 12339668-12344667 Medicago truncatula
Medtr2g032740 5.0kb downstream 5.0kb downstream 6038 true chr2: 12333630-12339667 Medicago truncatula
Medtr2g032740 5.0kb downstream 5.0kb downstream 5000 false chr2: 12333630-12338629 Medicago truncatula
Medtr2g032740 10.0kb upstream 10.0kb upstream 11038 true chr2: 12338630-12349667 Medicago truncatula
Medtr2g032740 10.0kb upstream 10.0kb upstream 10000 false chr2: 12339668-12349667 Medicago truncatula
Medtr2g032740 10.0kb downstream 10.0kb downstream 11038 true chr2: 12328630-12339667 Medicago truncatula
Medtr2g032740 10.0kb downstream 10.0kb downstream 10000 false chr2: 12328630-12338629 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632857 5273 Angiosperm View MSA
122271637 5265 Fabidae View MSA
124012234 5270 Rosid View MSA
123586114 5271 Pentapetalae View MSA
122620810 5272 Eudicot View MSA
120904961 5274 Embryophyte View MSA
122945610 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.018     Low Low
cufflinks 0.104        
cufflinks 0.132       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.066        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain