Gene : Medtr2g034090 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23118//PTHR23118:SF3 - ATP-CITRATE SYNTHASE Description:  ATP:citrate lyase
Genomic Order:  1814 Name:  ? Medtr2g034090
Secondary Identifier:  ? PAC:31066918
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5172 Medicago truncatula pathologic  
Mtruncatula PWY-5173 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g034090 0.5kb upstream 0.5kb upstream 6548 true chr2: 13008447-13014994 Medicago truncatula
Medtr2g034090 0.5kb upstream 0.5kb upstream 500 false chr2: 13014495-13014994 Medicago truncatula
Medtr2g034090 0.5kb downstream 0.5kb downstream 6548 true chr2: 13007947-13014494 Medicago truncatula
Medtr2g034090 0.5kb downstream 0.5kb downstream 500 false chr2: 13007947-13008446 Medicago truncatula
Medtr2g034090 1.0kb upstream 1.0kb upstream 7048 true chr2: 13008447-13015494 Medicago truncatula
Medtr2g034090 1.0kb upstream 1.0kb upstream 1000 false chr2: 13014495-13015494 Medicago truncatula
Medtr2g034090 1.0kb downstream 1.0kb downstream 7048 true chr2: 13007447-13014494 Medicago truncatula
Medtr2g034090 1.0kb downstream 1.0kb downstream 1000 false chr2: 13007447-13008446 Medicago truncatula
Medtr2g034090 2.0kb upstream 2.0kb upstream 8048 true chr2: 13008447-13016494 Medicago truncatula
Medtr2g034090 2.0kb upstream 2.0kb upstream 2000 false chr2: 13014495-13016494 Medicago truncatula
Medtr2g034090 2.0kb downstream 2.0kb downstream 8048 true chr2: 13006447-13014494 Medicago truncatula
Medtr2g034090 2.0kb downstream 2.0kb downstream 2000 false chr2: 13006447-13008446 Medicago truncatula
Medtr2g034090 5.0kb upstream 5.0kb upstream 11048 true chr2: 13008447-13019494 Medicago truncatula
Medtr2g034090 5.0kb upstream 5.0kb upstream 5000 false chr2: 13014495-13019494 Medicago truncatula
Medtr2g034090 5.0kb downstream 5.0kb downstream 11048 true chr2: 13003447-13014494 Medicago truncatula
Medtr2g034090 5.0kb downstream 5.0kb downstream 5000 false chr2: 13003447-13008446 Medicago truncatula
Medtr2g034090 10.0kb upstream 10.0kb upstream 16048 true chr2: 13008447-13024494 Medicago truncatula
Medtr2g034090 10.0kb upstream 10.0kb upstream 10000 false chr2: 13014495-13024494 Medicago truncatula
Medtr2g034090 10.0kb downstream 10.0kb downstream 16048 true chr2: 12998447-13014494 Medicago truncatula
Medtr2g034090 10.0kb downstream 10.0kb downstream 10000 false chr2: 12998447-13008446 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312569 5265 Fabidae View MSA
124062088 5270 Rosid View MSA
123736971 5271 Pentapetalae View MSA
122787632 5272 Eudicot View MSA
122045238 5273 Angiosperm View MSA
121345896 5274 Embryophyte View MSA
123427786 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.132        
cufflinks 10.315     High  
cufflinks 5.555        
cufflinks 19.275     High  
cufflinks 13.395     High  
cufflinks 5.171       Low
cufflinks 25.314     High  
cufflinks 6.159        
cufflinks 51.557     High High

0 Strain