Gene : Medtr2g034020 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23257:SF485 - PAS DOMAIN-CONTAINING PROTEIN TYROSINE KINASE Description:  PAS domain tyrosine kinase family protein
Genomic Order:  1809 Name:  ? Medtr2g034020
Secondary Identifier:  ? PAC:31063921
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g034020 0.5kb upstream 0.5kb upstream 7530 true chr2: 12974612-12982141 Medicago truncatula
Medtr2g034020 0.5kb upstream 0.5kb upstream 500 false chr2: 12981642-12982141 Medicago truncatula
Medtr2g034020 0.5kb downstream 0.5kb downstream 7530 true chr2: 12974112-12981641 Medicago truncatula
Medtr2g034020 0.5kb downstream 0.5kb downstream 500 false chr2: 12974112-12974611 Medicago truncatula
Medtr2g034020 1.0kb upstream 1.0kb upstream 8030 true chr2: 12974612-12982641 Medicago truncatula
Medtr2g034020 1.0kb upstream 1.0kb upstream 1000 false chr2: 12981642-12982641 Medicago truncatula
Medtr2g034020 1.0kb downstream 1.0kb downstream 8030 true chr2: 12973612-12981641 Medicago truncatula
Medtr2g034020 1.0kb downstream 1.0kb downstream 1000 false chr2: 12973612-12974611 Medicago truncatula
Medtr2g034020 2.0kb upstream 2.0kb upstream 9030 true chr2: 12974612-12983641 Medicago truncatula
Medtr2g034020 2.0kb upstream 2.0kb upstream 2000 false chr2: 12981642-12983641 Medicago truncatula
Medtr2g034020 2.0kb downstream 2.0kb downstream 9030 true chr2: 12972612-12981641 Medicago truncatula
Medtr2g034020 2.0kb downstream 2.0kb downstream 2000 false chr2: 12972612-12974611 Medicago truncatula
Medtr2g034020 5.0kb upstream 5.0kb upstream 12030 true chr2: 12974612-12986641 Medicago truncatula
Medtr2g034020 5.0kb upstream 5.0kb upstream 5000 false chr2: 12981642-12986641 Medicago truncatula
Medtr2g034020 5.0kb downstream 5.0kb downstream 12030 true chr2: 12969612-12981641 Medicago truncatula
Medtr2g034020 5.0kb downstream 5.0kb downstream 5000 false chr2: 12969612-12974611 Medicago truncatula
Medtr2g034020 10.0kb upstream 10.0kb upstream 17030 true chr2: 12974612-12991641 Medicago truncatula
Medtr2g034020 10.0kb upstream 10.0kb upstream 10000 false chr2: 12981642-12991641 Medicago truncatula
Medtr2g034020 10.0kb downstream 10.0kb downstream 17030 true chr2: 12964612-12981641 Medicago truncatula
Medtr2g034020 10.0kb downstream 10.0kb downstream 10000 false chr2: 12964612-12974611 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311561 5265 Fabidae View MSA
124062417 5270 Rosid View MSA
123745190 5271 Pentapetalae View MSA
122793223 5272 Eudicot View MSA
122045433 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310448 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.603     High High
cufflinks 6.385        
cufflinks 9.6        
cufflinks 6.206        
cufflinks 7.342        
cufflinks 4.375       Low
cufflinks 11.367     High High
cufflinks 7.404        
cufflinks 6.485        

0 Strain