Gene : Medtr2g034200 M. truncatula Mt4.0v1
Defline:  (1 of 41) PF00582 - Universal stress protein family (Usp) Description:  universal stress family protein
Genomic Order:  1821 Name:  ? Medtr2g034200
Secondary Identifier:  ? PAC:31069189
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g034200 0.5kb upstream 0.5kb upstream 2011 true chr2: 13068128-13070138 Medicago truncatula
Medtr2g034200 0.5kb upstream 0.5kb upstream 500 false chr2: 13068128-13068627 Medicago truncatula
Medtr2g034200 0.5kb downstream 0.5kb downstream 2011 true chr2: 13068628-13070638 Medicago truncatula
Medtr2g034200 0.5kb downstream 0.5kb downstream 500 false chr2: 13070139-13070638 Medicago truncatula
Medtr2g034200 1.0kb upstream 1.0kb upstream 2511 true chr2: 13067628-13070138 Medicago truncatula
Medtr2g034200 1.0kb upstream 1.0kb upstream 1000 false chr2: 13067628-13068627 Medicago truncatula
Medtr2g034200 1.0kb downstream 1.0kb downstream 2511 true chr2: 13068628-13071138 Medicago truncatula
Medtr2g034200 1.0kb downstream 1.0kb downstream 1000 false chr2: 13070139-13071138 Medicago truncatula
Medtr2g034200 2.0kb upstream 2.0kb upstream 3511 true chr2: 13066628-13070138 Medicago truncatula
Medtr2g034200 2.0kb upstream 2.0kb upstream 2000 false chr2: 13066628-13068627 Medicago truncatula
Medtr2g034200 2.0kb downstream 2.0kb downstream 3511 true chr2: 13068628-13072138 Medicago truncatula
Medtr2g034200 2.0kb downstream 2.0kb downstream 2000 false chr2: 13070139-13072138 Medicago truncatula
Medtr2g034200 5.0kb upstream 5.0kb upstream 6511 true chr2: 13063628-13070138 Medicago truncatula
Medtr2g034200 5.0kb upstream 5.0kb upstream 5000 false chr2: 13063628-13068627 Medicago truncatula
Medtr2g034200 5.0kb downstream 5.0kb downstream 6511 true chr2: 13068628-13075138 Medicago truncatula
Medtr2g034200 5.0kb downstream 5.0kb downstream 5000 false chr2: 13070139-13075138 Medicago truncatula
Medtr2g034200 10.0kb upstream 10.0kb upstream 11511 true chr2: 13058628-13070138 Medicago truncatula
Medtr2g034200 10.0kb upstream 10.0kb upstream 10000 false chr2: 13058628-13068627 Medicago truncatula
Medtr2g034200 10.0kb downstream 10.0kb downstream 11511 true chr2: 13068628-13080138 Medicago truncatula
Medtr2g034200 10.0kb downstream 10.0kb downstream 10000 false chr2: 13070139-13080138 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302986 5265 Fabidae View MSA
124063992 5270 Rosid View MSA
123739309 5271 Pentapetalae View MSA
122785643 5272 Eudicot View MSA
122048128 5273 Angiosperm View MSA
121348607 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain