Gene : Medtr2g035120 M. truncatula Mt4.0v1
Defline:  (1 of 36) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Description:  disease-resistance response protein
Genomic Order:  1882 Name:  ? Medtr2g035120
Secondary Identifier:  ? PAC:31066003
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g035120 0.5kb upstream 0.5kb upstream 1719 true chr2: 13500209-13501927 Medicago truncatula
Medtr2g035120 0.5kb upstream 0.5kb upstream 500 false chr2: 13500209-13500708 Medicago truncatula
Medtr2g035120 0.5kb downstream 0.5kb downstream 1719 true chr2: 13500709-13502427 Medicago truncatula
Medtr2g035120 0.5kb downstream 0.5kb downstream 500 false chr2: 13501928-13502427 Medicago truncatula
Medtr2g035120 1.0kb upstream 1.0kb upstream 2219 true chr2: 13499709-13501927 Medicago truncatula
Medtr2g035120 1.0kb upstream 1.0kb upstream 1000 false chr2: 13499709-13500708 Medicago truncatula
Medtr2g035120 1.0kb downstream 1.0kb downstream 2219 true chr2: 13500709-13502927 Medicago truncatula
Medtr2g035120 1.0kb downstream 1.0kb downstream 1000 false chr2: 13501928-13502927 Medicago truncatula
Medtr2g035120 2.0kb upstream 2.0kb upstream 3219 true chr2: 13498709-13501927 Medicago truncatula
Medtr2g035120 2.0kb upstream 2.0kb upstream 2000 false chr2: 13498709-13500708 Medicago truncatula
Medtr2g035120 2.0kb downstream 2.0kb downstream 3219 true chr2: 13500709-13503927 Medicago truncatula
Medtr2g035120 2.0kb downstream 2.0kb downstream 2000 false chr2: 13501928-13503927 Medicago truncatula
Medtr2g035120 5.0kb upstream 5.0kb upstream 6219 true chr2: 13495709-13501927 Medicago truncatula
Medtr2g035120 5.0kb upstream 5.0kb upstream 5000 false chr2: 13495709-13500708 Medicago truncatula
Medtr2g035120 5.0kb downstream 5.0kb downstream 6219 true chr2: 13500709-13506927 Medicago truncatula
Medtr2g035120 5.0kb downstream 5.0kb downstream 5000 false chr2: 13501928-13506927 Medicago truncatula
Medtr2g035120 10.0kb upstream 10.0kb upstream 11219 true chr2: 13490709-13501927 Medicago truncatula
Medtr2g035120 10.0kb upstream 10.0kb upstream 10000 false chr2: 13490709-13500708 Medicago truncatula
Medtr2g035120 10.0kb downstream 10.0kb downstream 11219 true chr2: 13500709-13511927 Medicago truncatula
Medtr2g035120 10.0kb downstream 10.0kb downstream 10000 false chr2: 13501928-13511927 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.047     Low  
cufflinks 0.021     Low  
cufflinks 0.038     Low  
cufflinks 4.787        
cufflinks 0.026     Low  
cufflinks 12.628     High High
cufflinks 14.528     High High
cufflinks 0.013     Low Low
cufflinks 23.111     High High

0 Strain