Gene : Medtr2g035105 M. truncatula Mt4.0v1
Defline:  (1 of 36) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Description:  disease-resistance response protein
Genomic Order:  1880 Name:  ? Medtr2g035105
Secondary Identifier:  ? PAC:31062817
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g035105 0.5kb upstream 0.5kb upstream 3461 true chr2: 13489102-13492562 Medicago truncatula
Medtr2g035105 0.5kb upstream 0.5kb upstream 500 false chr2: 13489102-13489601 Medicago truncatula
Medtr2g035105 0.5kb downstream 0.5kb downstream 3461 true chr2: 13489602-13493062 Medicago truncatula
Medtr2g035105 0.5kb downstream 0.5kb downstream 500 false chr2: 13492563-13493062 Medicago truncatula
Medtr2g035105 1.0kb upstream 1.0kb upstream 3961 true chr2: 13488602-13492562 Medicago truncatula
Medtr2g035105 1.0kb upstream 1.0kb upstream 1000 false chr2: 13488602-13489601 Medicago truncatula
Medtr2g035105 1.0kb downstream 1.0kb downstream 3961 true chr2: 13489602-13493562 Medicago truncatula
Medtr2g035105 1.0kb downstream 1.0kb downstream 1000 false chr2: 13492563-13493562 Medicago truncatula
Medtr2g035105 2.0kb upstream 2.0kb upstream 4961 true chr2: 13487602-13492562 Medicago truncatula
Medtr2g035105 2.0kb upstream 2.0kb upstream 2000 false chr2: 13487602-13489601 Medicago truncatula
Medtr2g035105 2.0kb downstream 2.0kb downstream 4961 true chr2: 13489602-13494562 Medicago truncatula
Medtr2g035105 2.0kb downstream 2.0kb downstream 2000 false chr2: 13492563-13494562 Medicago truncatula
Medtr2g035105 5.0kb upstream 5.0kb upstream 7961 true chr2: 13484602-13492562 Medicago truncatula
Medtr2g035105 5.0kb upstream 5.0kb upstream 5000 false chr2: 13484602-13489601 Medicago truncatula
Medtr2g035105 5.0kb downstream 5.0kb downstream 7961 true chr2: 13489602-13497562 Medicago truncatula
Medtr2g035105 5.0kb downstream 5.0kb downstream 5000 false chr2: 13492563-13497562 Medicago truncatula
Medtr2g035105 10.0kb upstream 10.0kb upstream 12961 true chr2: 13479602-13492562 Medicago truncatula
Medtr2g035105 10.0kb upstream 10.0kb upstream 10000 false chr2: 13479602-13489601 Medicago truncatula
Medtr2g035105 10.0kb downstream 10.0kb downstream 12961 true chr2: 13489602-13502562 Medicago truncatula
Medtr2g035105 10.0kb downstream 10.0kb downstream 10000 false chr2: 13492563-13502562 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 121.75     High  
cufflinks 2.704       Low
cufflinks 11.029     High  
cufflinks 292.254     High  
cufflinks 1.539       Low
cufflinks 299.915     High  
cufflinks 508.317     High High
cufflinks 3.787        
cufflinks 241.808     High  

0 Strain