Gene : Medtr2g034650 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23335:SF3 - CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 5-RELATED Description:  calmodulin-binding transcription activator
Genomic Order:  1853 Name:  ? Medtr2g034650
Secondary Identifier:  ? PAC:31068275
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g034650 0.5kb upstream 0.5kb upstream 6557 true chr2: 13256129-13262685 Medicago truncatula
Medtr2g034650 0.5kb upstream 0.5kb upstream 500 false chr2: 13262186-13262685 Medicago truncatula
Medtr2g034650 0.5kb downstream 0.5kb downstream 6557 true chr2: 13255629-13262185 Medicago truncatula
Medtr2g034650 0.5kb downstream 0.5kb downstream 500 false chr2: 13255629-13256128 Medicago truncatula
Medtr2g034650 1.0kb upstream 1.0kb upstream 7057 true chr2: 13256129-13263185 Medicago truncatula
Medtr2g034650 1.0kb upstream 1.0kb upstream 1000 false chr2: 13262186-13263185 Medicago truncatula
Medtr2g034650 1.0kb downstream 1.0kb downstream 7057 true chr2: 13255129-13262185 Medicago truncatula
Medtr2g034650 1.0kb downstream 1.0kb downstream 1000 false chr2: 13255129-13256128 Medicago truncatula
Medtr2g034650 2.0kb upstream 2.0kb upstream 8057 true chr2: 13256129-13264185 Medicago truncatula
Medtr2g034650 2.0kb upstream 2.0kb upstream 2000 false chr2: 13262186-13264185 Medicago truncatula
Medtr2g034650 2.0kb downstream 2.0kb downstream 8057 true chr2: 13254129-13262185 Medicago truncatula
Medtr2g034650 2.0kb downstream 2.0kb downstream 2000 false chr2: 13254129-13256128 Medicago truncatula
Medtr2g034650 5.0kb upstream 5.0kb upstream 11057 true chr2: 13256129-13267185 Medicago truncatula
Medtr2g034650 5.0kb upstream 5.0kb upstream 5000 false chr2: 13262186-13267185 Medicago truncatula
Medtr2g034650 5.0kb downstream 5.0kb downstream 11057 true chr2: 13251129-13262185 Medicago truncatula
Medtr2g034650 5.0kb downstream 5.0kb downstream 5000 false chr2: 13251129-13256128 Medicago truncatula
Medtr2g034650 10.0kb upstream 10.0kb upstream 16057 true chr2: 13256129-13272185 Medicago truncatula
Medtr2g034650 10.0kb upstream 10.0kb upstream 10000 false chr2: 13262186-13272185 Medicago truncatula
Medtr2g034650 10.0kb downstream 10.0kb downstream 16057 true chr2: 13246129-13262185 Medicago truncatula
Medtr2g034650 10.0kb downstream 10.0kb downstream 10000 false chr2: 13246129-13256128 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297763 5265 Fabidae View MSA
124060879 5270 Rosid View MSA
123739187 5271 Pentapetalae View MSA
122787070 5272 Eudicot View MSA
122044952 5273 Angiosperm View MSA
121310369 5274 Embryophyte View MSA
123347871 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.091        
cufflinks 17.366     High  
cufflinks 21.027     High High
cufflinks 6.034        
cufflinks 18.246     High  
cufflinks 3.461       Low
cufflinks 10.87     High  
cufflinks 20.383     High High
cufflinks 6.277        

0 Strain