Gene : Medtr2g021242 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR20852:SF53 - GLUTAMINE SYNTHETASE, CHLOROPLASTIC/MITOCHONDRIAL Description:  glutamine synthetase domain protein
Genomic Order:  1052 Name:  ? Medtr2g021242
Secondary Identifier:  ? PAC:31067927
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLNSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3282 Medicago truncatula pathologic  
Mtruncatula PWY-381 Medicago truncatula pathologic  
Mtruncatula PWY-6549 Medicago truncatula pathologic  
Mtruncatula PWY-6963 Medicago truncatula pathologic  
Mtruncatula PWY-6964 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g021242 0.5kb upstream 0.5kb upstream 3601 true chr2: 7191378-7194978 Medicago truncatula
Medtr2g021242 0.5kb upstream 0.5kb upstream 500 false chr2: 7194479-7194978 Medicago truncatula
Medtr2g021242 0.5kb downstream 0.5kb downstream 3601 true chr2: 7190878-7194478 Medicago truncatula
Medtr2g021242 0.5kb downstream 0.5kb downstream 500 false chr2: 7190878-7191377 Medicago truncatula
Medtr2g021242 1.0kb upstream 1.0kb upstream 4101 true chr2: 7191378-7195478 Medicago truncatula
Medtr2g021242 1.0kb upstream 1.0kb upstream 1000 false chr2: 7194479-7195478 Medicago truncatula
Medtr2g021242 1.0kb downstream 1.0kb downstream 4101 true chr2: 7190378-7194478 Medicago truncatula
Medtr2g021242 1.0kb downstream 1.0kb downstream 1000 false chr2: 7190378-7191377 Medicago truncatula
Medtr2g021242 2.0kb upstream 2.0kb upstream 5101 true chr2: 7191378-7196478 Medicago truncatula
Medtr2g021242 2.0kb upstream 2.0kb upstream 2000 false chr2: 7194479-7196478 Medicago truncatula
Medtr2g021242 2.0kb downstream 2.0kb downstream 5101 true chr2: 7189378-7194478 Medicago truncatula
Medtr2g021242 2.0kb downstream 2.0kb downstream 2000 false chr2: 7189378-7191377 Medicago truncatula
Medtr2g021242 5.0kb upstream 5.0kb upstream 8101 true chr2: 7191378-7199478 Medicago truncatula
Medtr2g021242 5.0kb upstream 5.0kb upstream 5000 false chr2: 7194479-7199478 Medicago truncatula
Medtr2g021242 5.0kb downstream 5.0kb downstream 8101 true chr2: 7186378-7194478 Medicago truncatula
Medtr2g021242 5.0kb downstream 5.0kb downstream 5000 false chr2: 7186378-7191377 Medicago truncatula
Medtr2g021242 10.0kb upstream 10.0kb upstream 13101 true chr2: 7191378-7204478 Medicago truncatula
Medtr2g021242 10.0kb upstream 10.0kb upstream 10000 false chr2: 7194479-7204478 Medicago truncatula
Medtr2g021242 10.0kb downstream 10.0kb downstream 13101 true chr2: 7181378-7194478 Medicago truncatula
Medtr2g021242 10.0kb downstream 10.0kb downstream 10000 false chr2: 7181378-7191377 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301518 5265 Fabidae View MSA
124069672 5270 Rosid View MSA
123741738 5271 Pentapetalae View MSA
122788688 5272 Eudicot View MSA
122046528 5273 Angiosperm View MSA
121310618 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.181        
cufflinks 15.844     High  
cufflinks 9.04        
cufflinks 0.12       Low
cufflinks 10.099        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.163       Low
cufflinks 14.196     High  
cufflinks 1.42        

0 Strain