Gene : Medtr2g021580 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31656:SF0 - LATE EMBRYOGENESIS ABUNDANT PROTEIN-LIKE PROTEIN Description:  root cap/late embryogenesis related
Genomic Order:  1076 Name:  ? Medtr2g021580
Secondary Identifier:  ? PAC:31068195
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g021580 0.5kb upstream 0.5kb upstream 1815 true chr2: 7343803-7345617 Medicago truncatula
Medtr2g021580 0.5kb upstream 0.5kb upstream 500 false chr2: 7345118-7345617 Medicago truncatula
Medtr2g021580 0.5kb downstream 0.5kb downstream 1815 true chr2: 7343303-7345117 Medicago truncatula
Medtr2g021580 0.5kb downstream 0.5kb downstream 500 false chr2: 7343303-7343802 Medicago truncatula
Medtr2g021580 1.0kb upstream 1.0kb upstream 2315 true chr2: 7343803-7346117 Medicago truncatula
Medtr2g021580 1.0kb upstream 1.0kb upstream 1000 false chr2: 7345118-7346117 Medicago truncatula
Medtr2g021580 1.0kb downstream 1.0kb downstream 2315 true chr2: 7342803-7345117 Medicago truncatula
Medtr2g021580 1.0kb downstream 1.0kb downstream 1000 false chr2: 7342803-7343802 Medicago truncatula
Medtr2g021580 2.0kb upstream 2.0kb upstream 3315 true chr2: 7343803-7347117 Medicago truncatula
Medtr2g021580 2.0kb upstream 2.0kb upstream 2000 false chr2: 7345118-7347117 Medicago truncatula
Medtr2g021580 2.0kb downstream 2.0kb downstream 3315 true chr2: 7341803-7345117 Medicago truncatula
Medtr2g021580 2.0kb downstream 2.0kb downstream 2000 false chr2: 7341803-7343802 Medicago truncatula
Medtr2g021580 5.0kb upstream 5.0kb upstream 6315 true chr2: 7343803-7350117 Medicago truncatula
Medtr2g021580 5.0kb upstream 5.0kb upstream 5000 false chr2: 7345118-7350117 Medicago truncatula
Medtr2g021580 5.0kb downstream 5.0kb downstream 6315 true chr2: 7338803-7345117 Medicago truncatula
Medtr2g021580 5.0kb downstream 5.0kb downstream 5000 false chr2: 7338803-7343802 Medicago truncatula
Medtr2g021580 10.0kb upstream 10.0kb upstream 11315 true chr2: 7343803-7355117 Medicago truncatula
Medtr2g021580 10.0kb upstream 10.0kb upstream 10000 false chr2: 7345118-7355117 Medicago truncatula
Medtr2g021580 10.0kb downstream 10.0kb downstream 11315 true chr2: 7333803-7345117 Medicago truncatula
Medtr2g021580 10.0kb downstream 10.0kb downstream 10000 false chr2: 7333803-7343802 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312535 5265 Fabidae View MSA
124073376 5270 Rosid View MSA
123752203 5271 Pentapetalae View MSA
122797654 5272 Eudicot View MSA
122050447 5273 Angiosperm View MSA
121349873 5274 Embryophyte View MSA
123381481 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.16        
cufflinks 0.009     Low Low
cufflinks 0.931        
cufflinks 1.454        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.647        

0 Strain