Gene : Medtr2g025050 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Description:  plastid lipid-associated protein
Genomic Order:  1278 Name:  ? Medtr2g025050
Secondary Identifier:  ? PAC:31069243
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g025050 0.5kb upstream 0.5kb upstream 3081 true chr2: 8882730-8885810 Medicago truncatula
Medtr2g025050 0.5kb upstream 0.5kb upstream 500 false chr2: 8885311-8885810 Medicago truncatula
Medtr2g025050 0.5kb downstream 0.5kb downstream 3081 true chr2: 8882230-8885310 Medicago truncatula
Medtr2g025050 0.5kb downstream 0.5kb downstream 500 false chr2: 8882230-8882729 Medicago truncatula
Medtr2g025050 1.0kb upstream 1.0kb upstream 3581 true chr2: 8882730-8886310 Medicago truncatula
Medtr2g025050 1.0kb upstream 1.0kb upstream 1000 false chr2: 8885311-8886310 Medicago truncatula
Medtr2g025050 1.0kb downstream 1.0kb downstream 3581 true chr2: 8881730-8885310 Medicago truncatula
Medtr2g025050 1.0kb downstream 1.0kb downstream 1000 false chr2: 8881730-8882729 Medicago truncatula
Medtr2g025050 2.0kb upstream 2.0kb upstream 4581 true chr2: 8882730-8887310 Medicago truncatula
Medtr2g025050 2.0kb upstream 2.0kb upstream 2000 false chr2: 8885311-8887310 Medicago truncatula
Medtr2g025050 2.0kb downstream 2.0kb downstream 4581 true chr2: 8880730-8885310 Medicago truncatula
Medtr2g025050 2.0kb downstream 2.0kb downstream 2000 false chr2: 8880730-8882729 Medicago truncatula
Medtr2g025050 5.0kb upstream 5.0kb upstream 7581 true chr2: 8882730-8890310 Medicago truncatula
Medtr2g025050 5.0kb upstream 5.0kb upstream 5000 false chr2: 8885311-8890310 Medicago truncatula
Medtr2g025050 5.0kb downstream 5.0kb downstream 7581 true chr2: 8877730-8885310 Medicago truncatula
Medtr2g025050 5.0kb downstream 5.0kb downstream 5000 false chr2: 8877730-8882729 Medicago truncatula
Medtr2g025050 10.0kb upstream 10.0kb upstream 12581 true chr2: 8882730-8895310 Medicago truncatula
Medtr2g025050 10.0kb upstream 10.0kb upstream 10000 false chr2: 8885311-8895310 Medicago truncatula
Medtr2g025050 10.0kb downstream 10.0kb downstream 12581 true chr2: 8872730-8885310 Medicago truncatula
Medtr2g025050 10.0kb downstream 10.0kb downstream 10000 false chr2: 8872730-8882729 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303494 5265 Fabidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.129     High  
cufflinks 10.276     High  
cufflinks 13.114     High  
cufflinks 17.799     High  
cufflinks 15.753     High  
cufflinks 1.956       Low
cufflinks 9.707        
cufflinks 8.759        
cufflinks 24.704     High High

0 Strain