Gene : Medtr2g024060 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10146 - PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN Description:  proline synthetase associated protein
Genomic Order:  1249 Name:  ? Medtr2g024060
Secondary Identifier:  ? PAC:31067224
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g024060 0.5kb upstream 0.5kb upstream 3146 true chr2: 8557301-8560446 Medicago truncatula
Medtr2g024060 0.5kb upstream 0.5kb upstream 500 false chr2: 8557301-8557800 Medicago truncatula
Medtr2g024060 0.5kb downstream 0.5kb downstream 3146 true chr2: 8557801-8560946 Medicago truncatula
Medtr2g024060 0.5kb downstream 0.5kb downstream 500 false chr2: 8560447-8560946 Medicago truncatula
Medtr2g024060 1.0kb upstream 1.0kb upstream 3646 true chr2: 8556801-8560446 Medicago truncatula
Medtr2g024060 1.0kb upstream 1.0kb upstream 1000 false chr2: 8556801-8557800 Medicago truncatula
Medtr2g024060 1.0kb downstream 1.0kb downstream 3646 true chr2: 8557801-8561446 Medicago truncatula
Medtr2g024060 1.0kb downstream 1.0kb downstream 1000 false chr2: 8560447-8561446 Medicago truncatula
Medtr2g024060 2.0kb upstream 2.0kb upstream 4646 true chr2: 8555801-8560446 Medicago truncatula
Medtr2g024060 2.0kb upstream 2.0kb upstream 2000 false chr2: 8555801-8557800 Medicago truncatula
Medtr2g024060 2.0kb downstream 2.0kb downstream 4646 true chr2: 8557801-8562446 Medicago truncatula
Medtr2g024060 2.0kb downstream 2.0kb downstream 2000 false chr2: 8560447-8562446 Medicago truncatula
Medtr2g024060 5.0kb upstream 5.0kb upstream 7646 true chr2: 8552801-8560446 Medicago truncatula
Medtr2g024060 5.0kb upstream 5.0kb upstream 5000 false chr2: 8552801-8557800 Medicago truncatula
Medtr2g024060 5.0kb downstream 5.0kb downstream 7646 true chr2: 8557801-8565446 Medicago truncatula
Medtr2g024060 5.0kb downstream 5.0kb downstream 5000 false chr2: 8560447-8565446 Medicago truncatula
Medtr2g024060 10.0kb upstream 10.0kb upstream 12646 true chr2: 8547801-8560446 Medicago truncatula
Medtr2g024060 10.0kb upstream 10.0kb upstream 10000 false chr2: 8547801-8557800 Medicago truncatula
Medtr2g024060 10.0kb downstream 10.0kb downstream 12646 true chr2: 8557801-8570446 Medicago truncatula
Medtr2g024060 10.0kb downstream 10.0kb downstream 10000 false chr2: 8560447-8570446 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311369 5265 Fabidae View MSA
124066747 5270 Rosid View MSA
123741353 5271 Pentapetalae View MSA
122795077 5272 Eudicot View MSA
122042316 5273 Angiosperm View MSA
121344237 5274 Embryophyte View MSA
123424021 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.301       High
cufflinks 2.306        
cufflinks 3.083        
cufflinks 3.727        
cufflinks 2.926        
cufflinks 2.342        
cufflinks 6.06       High
cufflinks 2.083       Low
cufflinks 2.669        

0 Strain