Gene : Medtr2g025590 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13011 - TFIIF-ALPHA Description:  transcription initiation factor IIF subunit alpha
Genomic Order:  1317 Name:  ? Medtr2g025590
Secondary Identifier:  ? PAC:31069276
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g025590 0.5kb upstream 0.5kb upstream 8444 true chr2: 9148860-9157303 Medicago truncatula
Medtr2g025590 0.5kb upstream 0.5kb upstream 500 false chr2: 9156804-9157303 Medicago truncatula
Medtr2g025590 0.5kb downstream 0.5kb downstream 8444 true chr2: 9148360-9156803 Medicago truncatula
Medtr2g025590 0.5kb downstream 0.5kb downstream 500 false chr2: 9148360-9148859 Medicago truncatula
Medtr2g025590 1.0kb upstream 1.0kb upstream 8944 true chr2: 9148860-9157803 Medicago truncatula
Medtr2g025590 1.0kb upstream 1.0kb upstream 1000 false chr2: 9156804-9157803 Medicago truncatula
Medtr2g025590 1.0kb downstream 1.0kb downstream 8944 true chr2: 9147860-9156803 Medicago truncatula
Medtr2g025590 1.0kb downstream 1.0kb downstream 1000 false chr2: 9147860-9148859 Medicago truncatula
Medtr2g025590 2.0kb upstream 2.0kb upstream 9944 true chr2: 9148860-9158803 Medicago truncatula
Medtr2g025590 2.0kb upstream 2.0kb upstream 2000 false chr2: 9156804-9158803 Medicago truncatula
Medtr2g025590 2.0kb downstream 2.0kb downstream 9944 true chr2: 9146860-9156803 Medicago truncatula
Medtr2g025590 2.0kb downstream 2.0kb downstream 2000 false chr2: 9146860-9148859 Medicago truncatula
Medtr2g025590 5.0kb upstream 5.0kb upstream 12944 true chr2: 9148860-9161803 Medicago truncatula
Medtr2g025590 5.0kb upstream 5.0kb upstream 5000 false chr2: 9156804-9161803 Medicago truncatula
Medtr2g025590 5.0kb downstream 5.0kb downstream 12944 true chr2: 9143860-9156803 Medicago truncatula
Medtr2g025590 5.0kb downstream 5.0kb downstream 5000 false chr2: 9143860-9148859 Medicago truncatula
Medtr2g025590 10.0kb upstream 10.0kb upstream 17944 true chr2: 9148860-9166803 Medicago truncatula
Medtr2g025590 10.0kb upstream 10.0kb upstream 10000 false chr2: 9156804-9166803 Medicago truncatula
Medtr2g025590 10.0kb downstream 10.0kb downstream 17944 true chr2: 9138860-9156803 Medicago truncatula
Medtr2g025590 10.0kb downstream 10.0kb downstream 10000 false chr2: 9138860-9148859 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314295 5265 Fabidae View MSA
124061584 5270 Rosid View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.13        
cufflinks 7.486        
cufflinks 7.322        
cufflinks 1.992       Low
cufflinks 7.202        
cufflinks 1.354       Low
cufflinks 3.871        
cufflinks 6.18        
cufflinks 3.48        

0 Strain