Gene : Medtr2g026685 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22814//PTHR22814:SF94 - COPPER TRANSPORT PROTEIN ATOX1-RELATED Description:  heavy metal transport/detoxification superfamily protein
Genomic Order:  1395 Name:  ? Medtr2g026685
Secondary Identifier:  ? PAC:31067201
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g026685 0.5kb upstream 0.5kb upstream 5373 true chr2: 9694723-9700095 Medicago truncatula
Medtr2g026685 0.5kb upstream 0.5kb upstream 500 false chr2: 9694723-9695222 Medicago truncatula
Medtr2g026685 0.5kb downstream 0.5kb downstream 5373 true chr2: 9695223-9700595 Medicago truncatula
Medtr2g026685 0.5kb downstream 0.5kb downstream 500 false chr2: 9700096-9700595 Medicago truncatula
Medtr2g026685 1.0kb upstream 1.0kb upstream 5873 true chr2: 9694223-9700095 Medicago truncatula
Medtr2g026685 1.0kb upstream 1.0kb upstream 1000 false chr2: 9694223-9695222 Medicago truncatula
Medtr2g026685 1.0kb downstream 1.0kb downstream 5873 true chr2: 9695223-9701095 Medicago truncatula
Medtr2g026685 1.0kb downstream 1.0kb downstream 1000 false chr2: 9700096-9701095 Medicago truncatula
Medtr2g026685 2.0kb upstream 2.0kb upstream 6873 true chr2: 9693223-9700095 Medicago truncatula
Medtr2g026685 2.0kb upstream 2.0kb upstream 2000 false chr2: 9693223-9695222 Medicago truncatula
Medtr2g026685 2.0kb downstream 2.0kb downstream 6873 true chr2: 9695223-9702095 Medicago truncatula
Medtr2g026685 2.0kb downstream 2.0kb downstream 2000 false chr2: 9700096-9702095 Medicago truncatula
Medtr2g026685 5.0kb upstream 5.0kb upstream 9873 true chr2: 9690223-9700095 Medicago truncatula
Medtr2g026685 5.0kb upstream 5.0kb upstream 5000 false chr2: 9690223-9695222 Medicago truncatula
Medtr2g026685 5.0kb downstream 5.0kb downstream 9873 true chr2: 9695223-9705095 Medicago truncatula
Medtr2g026685 5.0kb downstream 5.0kb downstream 5000 false chr2: 9700096-9705095 Medicago truncatula
Medtr2g026685 10.0kb upstream 10.0kb upstream 14873 true chr2: 9685223-9700095 Medicago truncatula
Medtr2g026685 10.0kb upstream 10.0kb upstream 10000 false chr2: 9685223-9695222 Medicago truncatula
Medtr2g026685 10.0kb downstream 10.0kb downstream 14873 true chr2: 9695223-9710095 Medicago truncatula
Medtr2g026685 10.0kb downstream 10.0kb downstream 10000 false chr2: 9700096-9710095 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312905 5265 Fabidae View MSA
124070367 5270 Rosid View MSA
123750804 5271 Pentapetalae View MSA
122795172 5272 Eudicot View MSA
122041833 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032     Low Low
cufflinks 14.411     High High
cufflinks 10.28     High  
cufflinks 0.115        
cufflinks 14.758     High High
cufflinks 0.193        
cufflinks 0.276        
cufflinks 12.545     High High
cufflinks 0.141        

0 Strain