Gene : Medtr2g086580 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23177:SF20 - RHO GTPASE-ACTIVATING PROTEIN 1-RELATED Description:  PAK-box/P21-Rho-binding domain Rho GTPase activating protein
Genomic Order:  4570 Name:  ? Medtr2g086580
Secondary Identifier:  ? PAC:31063606
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g086580 0.5kb upstream 0.5kb upstream 3751 true chr2: 36404912-36408662 Medicago truncatula
Medtr2g086580 0.5kb upstream 0.5kb upstream 500 false chr2: 36404912-36405411 Medicago truncatula
Medtr2g086580 0.5kb downstream 0.5kb downstream 3751 true chr2: 36405412-36409162 Medicago truncatula
Medtr2g086580 0.5kb downstream 0.5kb downstream 500 false chr2: 36408663-36409162 Medicago truncatula
Medtr2g086580 1.0kb upstream 1.0kb upstream 4251 true chr2: 36404412-36408662 Medicago truncatula
Medtr2g086580 1.0kb upstream 1.0kb upstream 1000 false chr2: 36404412-36405411 Medicago truncatula
Medtr2g086580 1.0kb downstream 1.0kb downstream 4251 true chr2: 36405412-36409662 Medicago truncatula
Medtr2g086580 1.0kb downstream 1.0kb downstream 1000 false chr2: 36408663-36409662 Medicago truncatula
Medtr2g086580 2.0kb upstream 2.0kb upstream 5251 true chr2: 36403412-36408662 Medicago truncatula
Medtr2g086580 2.0kb upstream 2.0kb upstream 2000 false chr2: 36403412-36405411 Medicago truncatula
Medtr2g086580 2.0kb downstream 2.0kb downstream 5251 true chr2: 36405412-36410662 Medicago truncatula
Medtr2g086580 2.0kb downstream 2.0kb downstream 2000 false chr2: 36408663-36410662 Medicago truncatula
Medtr2g086580 5.0kb upstream 5.0kb upstream 8251 true chr2: 36400412-36408662 Medicago truncatula
Medtr2g086580 5.0kb upstream 5.0kb upstream 5000 false chr2: 36400412-36405411 Medicago truncatula
Medtr2g086580 5.0kb downstream 5.0kb downstream 8251 true chr2: 36405412-36413662 Medicago truncatula
Medtr2g086580 5.0kb downstream 5.0kb downstream 5000 false chr2: 36408663-36413662 Medicago truncatula
Medtr2g086580 10.0kb upstream 10.0kb upstream 13251 true chr2: 36395412-36408662 Medicago truncatula
Medtr2g086580 10.0kb upstream 10.0kb upstream 10000 false chr2: 36395412-36405411 Medicago truncatula
Medtr2g086580 10.0kb downstream 10.0kb downstream 13251 true chr2: 36405412-36418662 Medicago truncatula
Medtr2g086580 10.0kb downstream 10.0kb downstream 10000 false chr2: 36408663-36418662 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306505 5265 Fabidae View MSA
124070990 5270 Rosid View MSA
123748530 5271 Pentapetalae View MSA
122791760 5272 Eudicot View MSA
122045219 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.152       Low
cufflinks 2.594       High
cufflinks 0.939        
cufflinks 0.426        
cufflinks 3.795       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.666        
cufflinks 1.285        
cufflinks 1.067        

0 Strain