Gene : Medtr2g086600 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23088:SF26 - N-CARBAMOYLPUTRESCINE AMIDASE Description:  N-carbamoylputrescine amidohydrolase, putative
Genomic Order:  4572 Name:  ? Medtr2g086600
Secondary Identifier:  ? PAC:31063467
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula POLYAMINSYN3-PWY Medicago truncatula pathologic  
Mtruncatula PWY-43 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g086600 0.5kb upstream 0.5kb upstream 3736 true chr2: 36414054-36417789 Medicago truncatula
Medtr2g086600 0.5kb upstream 0.5kb upstream 500 false chr2: 36417290-36417789 Medicago truncatula
Medtr2g086600 0.5kb downstream 0.5kb downstream 3736 true chr2: 36413554-36417289 Medicago truncatula
Medtr2g086600 0.5kb downstream 0.5kb downstream 500 false chr2: 36413554-36414053 Medicago truncatula
Medtr2g086600 1.0kb upstream 1.0kb upstream 4236 true chr2: 36414054-36418289 Medicago truncatula
Medtr2g086600 1.0kb upstream 1.0kb upstream 1000 false chr2: 36417290-36418289 Medicago truncatula
Medtr2g086600 1.0kb downstream 1.0kb downstream 4236 true chr2: 36413054-36417289 Medicago truncatula
Medtr2g086600 1.0kb downstream 1.0kb downstream 1000 false chr2: 36413054-36414053 Medicago truncatula
Medtr2g086600 2.0kb upstream 2.0kb upstream 5236 true chr2: 36414054-36419289 Medicago truncatula
Medtr2g086600 2.0kb upstream 2.0kb upstream 2000 false chr2: 36417290-36419289 Medicago truncatula
Medtr2g086600 2.0kb downstream 2.0kb downstream 5236 true chr2: 36412054-36417289 Medicago truncatula
Medtr2g086600 2.0kb downstream 2.0kb downstream 2000 false chr2: 36412054-36414053 Medicago truncatula
Medtr2g086600 5.0kb upstream 5.0kb upstream 8236 true chr2: 36414054-36422289 Medicago truncatula
Medtr2g086600 5.0kb upstream 5.0kb upstream 5000 false chr2: 36417290-36422289 Medicago truncatula
Medtr2g086600 5.0kb downstream 5.0kb downstream 8236 true chr2: 36409054-36417289 Medicago truncatula
Medtr2g086600 5.0kb downstream 5.0kb downstream 5000 false chr2: 36409054-36414053 Medicago truncatula
Medtr2g086600 10.0kb upstream 10.0kb upstream 13236 true chr2: 36414054-36427289 Medicago truncatula
Medtr2g086600 10.0kb upstream 10.0kb upstream 10000 false chr2: 36417290-36427289 Medicago truncatula
Medtr2g086600 10.0kb downstream 10.0kb downstream 13236 true chr2: 36404054-36417289 Medicago truncatula
Medtr2g086600 10.0kb downstream 10.0kb downstream 10000 false chr2: 36404054-36414053 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303763 5265 Fabidae View MSA
124064750 5270 Rosid View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.746     High High
cufflinks 7.779        
cufflinks 10.521     High  
cufflinks 5.717       Low
cufflinks 8.674        
cufflinks 4.833       Low
cufflinks 10.383     High  
cufflinks 7.683        
cufflinks 7.107        

0 Strain