Gene : Medtr2g088420 M. truncatula Mt4.0v1
Defline:  (1 of 32) PF01107 - Viral movement protein (MP) (MP) Description:  viral movement protein
Genomic Order:  4696 Name:  ? Medtr2g088420
Secondary Identifier:  ? PAC:31067697
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g088420 0.5kb upstream 0.5kb upstream 1138 true chr2: 37270403-37271540 Medicago truncatula
Medtr2g088420 0.5kb upstream 0.5kb upstream 500 false chr2: 37270403-37270902 Medicago truncatula
Medtr2g088420 0.5kb downstream 0.5kb downstream 1138 true chr2: 37270903-37272040 Medicago truncatula
Medtr2g088420 0.5kb downstream 0.5kb downstream 500 false chr2: 37271541-37272040 Medicago truncatula
Medtr2g088420 1.0kb upstream 1.0kb upstream 1638 true chr2: 37269903-37271540 Medicago truncatula
Medtr2g088420 1.0kb upstream 1.0kb upstream 1000 false chr2: 37269903-37270902 Medicago truncatula
Medtr2g088420 1.0kb downstream 1.0kb downstream 1638 true chr2: 37270903-37272540 Medicago truncatula
Medtr2g088420 1.0kb downstream 1.0kb downstream 1000 false chr2: 37271541-37272540 Medicago truncatula
Medtr2g088420 2.0kb upstream 2.0kb upstream 2638 true chr2: 37268903-37271540 Medicago truncatula
Medtr2g088420 2.0kb upstream 2.0kb upstream 2000 false chr2: 37268903-37270902 Medicago truncatula
Medtr2g088420 2.0kb downstream 2.0kb downstream 2638 true chr2: 37270903-37273540 Medicago truncatula
Medtr2g088420 2.0kb downstream 2.0kb downstream 2000 false chr2: 37271541-37273540 Medicago truncatula
Medtr2g088420 5.0kb upstream 5.0kb upstream 5638 true chr2: 37265903-37271540 Medicago truncatula
Medtr2g088420 5.0kb upstream 5.0kb upstream 5000 false chr2: 37265903-37270902 Medicago truncatula
Medtr2g088420 5.0kb downstream 5.0kb downstream 5638 true chr2: 37270903-37276540 Medicago truncatula
Medtr2g088420 5.0kb downstream 5.0kb downstream 5000 false chr2: 37271541-37276540 Medicago truncatula
Medtr2g088420 10.0kb upstream 10.0kb upstream 10638 true chr2: 37260903-37271540 Medicago truncatula
Medtr2g088420 10.0kb upstream 10.0kb upstream 10000 false chr2: 37260903-37270902 Medicago truncatula
Medtr2g088420 10.0kb downstream 10.0kb downstream 10638 true chr2: 37270903-37281540 Medicago truncatula
Medtr2g088420 10.0kb downstream 10.0kb downstream 10000 false chr2: 37271541-37281540 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122288761 5265 Fabidae View MSA
124028953 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain