Gene : Medtr2g088980 M. truncatula Mt4.0v1
Defline:  (1 of 90) PF01657 - Salt stress response/antifungal (Stress-antifung) Description:  cysteine-rich RLK (receptor-like kinase) protein
Genomic Order:  4727 Name:  ? Medtr2g088980
Secondary Identifier:  ? PAC:31063857
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g088980 0.5kb upstream 0.5kb upstream 1663 true chr2: 37530024-37531686 Medicago truncatula
Medtr2g088980 0.5kb upstream 0.5kb upstream 500 false chr2: 37530024-37530523 Medicago truncatula
Medtr2g088980 0.5kb downstream 0.5kb downstream 1663 true chr2: 37530524-37532186 Medicago truncatula
Medtr2g088980 0.5kb downstream 0.5kb downstream 500 false chr2: 37531687-37532186 Medicago truncatula
Medtr2g088980 1.0kb upstream 1.0kb upstream 2163 true chr2: 37529524-37531686 Medicago truncatula
Medtr2g088980 1.0kb upstream 1.0kb upstream 1000 false chr2: 37529524-37530523 Medicago truncatula
Medtr2g088980 1.0kb downstream 1.0kb downstream 2163 true chr2: 37530524-37532686 Medicago truncatula
Medtr2g088980 1.0kb downstream 1.0kb downstream 1000 false chr2: 37531687-37532686 Medicago truncatula
Medtr2g088980 2.0kb upstream 2.0kb upstream 3163 true chr2: 37528524-37531686 Medicago truncatula
Medtr2g088980 2.0kb upstream 2.0kb upstream 2000 false chr2: 37528524-37530523 Medicago truncatula
Medtr2g088980 2.0kb downstream 2.0kb downstream 3163 true chr2: 37530524-37533686 Medicago truncatula
Medtr2g088980 2.0kb downstream 2.0kb downstream 2000 false chr2: 37531687-37533686 Medicago truncatula
Medtr2g088980 5.0kb upstream 5.0kb upstream 6163 true chr2: 37525524-37531686 Medicago truncatula
Medtr2g088980 5.0kb upstream 5.0kb upstream 5000 false chr2: 37525524-37530523 Medicago truncatula
Medtr2g088980 5.0kb downstream 5.0kb downstream 6163 true chr2: 37530524-37536686 Medicago truncatula
Medtr2g088980 5.0kb downstream 5.0kb downstream 5000 false chr2: 37531687-37536686 Medicago truncatula
Medtr2g088980 10.0kb upstream 10.0kb upstream 11163 true chr2: 37520524-37531686 Medicago truncatula
Medtr2g088980 10.0kb upstream 10.0kb upstream 10000 false chr2: 37520524-37530523 Medicago truncatula
Medtr2g088980 10.0kb downstream 10.0kb downstream 11163 true chr2: 37530524-37541686 Medicago truncatula
Medtr2g088980 10.0kb downstream 10.0kb downstream 10000 false chr2: 37531687-37541686 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314892 5265 Fabidae View MSA
124074309 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.379     High Low
cufflinks 19.864     High  
cufflinks 13.512     High  
cufflinks 35.904     High  
cufflinks 21.33     High  
cufflinks 42.338     High High
cufflinks 45.585     High High
cufflinks 10.887     High Low
cufflinks 26.302     High  

0 Strain