Gene : Medtr2g088770 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31235:SF39 - PEROXIDASE 3-RELATED Description:  peroxidase family protein
Genomic Order:  4713 Name:  ? Medtr2g088770
Secondary Identifier:  ? PAC:31066585
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5466 Medicago truncatula pathologic  
Mtruncatula PWY-6824 Medicago truncatula pathologic  
Mtruncatula PWY-7214 Medicago truncatula pathologic  
Mtruncatula PWY-7445 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g088770 0.5kb upstream 0.5kb upstream 2331 true chr2: 37433369-37435699 Medicago truncatula
Medtr2g088770 0.5kb upstream 0.5kb upstream 500 false chr2: 37433369-37433868 Medicago truncatula
Medtr2g088770 0.5kb downstream 0.5kb downstream 2331 true chr2: 37433869-37436199 Medicago truncatula
Medtr2g088770 0.5kb downstream 0.5kb downstream 500 false chr2: 37435700-37436199 Medicago truncatula
Medtr2g088770 1.0kb upstream 1.0kb upstream 2831 true chr2: 37432869-37435699 Medicago truncatula
Medtr2g088770 1.0kb upstream 1.0kb upstream 1000 false chr2: 37432869-37433868 Medicago truncatula
Medtr2g088770 1.0kb downstream 1.0kb downstream 2831 true chr2: 37433869-37436699 Medicago truncatula
Medtr2g088770 1.0kb downstream 1.0kb downstream 1000 false chr2: 37435700-37436699 Medicago truncatula
Medtr2g088770 2.0kb upstream 2.0kb upstream 3831 true chr2: 37431869-37435699 Medicago truncatula
Medtr2g088770 2.0kb upstream 2.0kb upstream 2000 false chr2: 37431869-37433868 Medicago truncatula
Medtr2g088770 2.0kb downstream 2.0kb downstream 3831 true chr2: 37433869-37437699 Medicago truncatula
Medtr2g088770 2.0kb downstream 2.0kb downstream 2000 false chr2: 37435700-37437699 Medicago truncatula
Medtr2g088770 5.0kb upstream 5.0kb upstream 6831 true chr2: 37428869-37435699 Medicago truncatula
Medtr2g088770 5.0kb upstream 5.0kb upstream 5000 false chr2: 37428869-37433868 Medicago truncatula
Medtr2g088770 5.0kb downstream 5.0kb downstream 6831 true chr2: 37433869-37440699 Medicago truncatula
Medtr2g088770 5.0kb downstream 5.0kb downstream 5000 false chr2: 37435700-37440699 Medicago truncatula
Medtr2g088770 10.0kb upstream 10.0kb upstream 11831 true chr2: 37423869-37435699 Medicago truncatula
Medtr2g088770 10.0kb upstream 10.0kb upstream 10000 false chr2: 37423869-37433868 Medicago truncatula
Medtr2g088770 10.0kb downstream 10.0kb downstream 11831 true chr2: 37433869-37445699 Medicago truncatula
Medtr2g088770 10.0kb downstream 10.0kb downstream 10000 false chr2: 37435700-37445699 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300205 5265 Fabidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.483       Low
cufflinks 8.849        
cufflinks 5.683        
cufflinks 30.046     High  
cufflinks 8.796        
cufflinks 13.332     High  
cufflinks 36.353     High  
cufflinks 4.803        
cufflinks 96.012     High High

0 Strain