Gene : Medtr2g088470 M. truncatula Mt4.0v1
Defline:  (1 of 15) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) Description:  homeobox leucine zipper protein
Genomic Order:  4700 Name:  ? Medtr2g088470
Secondary Identifier:  ? PAC:31065982
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g088470 0.5kb upstream 0.5kb upstream 7103 true chr2: 37300036-37307138 Medicago truncatula
Medtr2g088470 0.5kb upstream 0.5kb upstream 500 false chr2: 37306639-37307138 Medicago truncatula
Medtr2g088470 0.5kb downstream 0.5kb downstream 7103 true chr2: 37299536-37306638 Medicago truncatula
Medtr2g088470 0.5kb downstream 0.5kb downstream 500 false chr2: 37299536-37300035 Medicago truncatula
Medtr2g088470 1.0kb upstream 1.0kb upstream 7603 true chr2: 37300036-37307638 Medicago truncatula
Medtr2g088470 1.0kb upstream 1.0kb upstream 1000 false chr2: 37306639-37307638 Medicago truncatula
Medtr2g088470 1.0kb downstream 1.0kb downstream 7603 true chr2: 37299036-37306638 Medicago truncatula
Medtr2g088470 1.0kb downstream 1.0kb downstream 1000 false chr2: 37299036-37300035 Medicago truncatula
Medtr2g088470 2.0kb upstream 2.0kb upstream 8603 true chr2: 37300036-37308638 Medicago truncatula
Medtr2g088470 2.0kb upstream 2.0kb upstream 2000 false chr2: 37306639-37308638 Medicago truncatula
Medtr2g088470 2.0kb downstream 2.0kb downstream 8603 true chr2: 37298036-37306638 Medicago truncatula
Medtr2g088470 2.0kb downstream 2.0kb downstream 2000 false chr2: 37298036-37300035 Medicago truncatula
Medtr2g088470 5.0kb upstream 5.0kb upstream 11603 true chr2: 37300036-37311638 Medicago truncatula
Medtr2g088470 5.0kb upstream 5.0kb upstream 5000 false chr2: 37306639-37311638 Medicago truncatula
Medtr2g088470 5.0kb downstream 5.0kb downstream 11603 true chr2: 37295036-37306638 Medicago truncatula
Medtr2g088470 5.0kb downstream 5.0kb downstream 5000 false chr2: 37295036-37300035 Medicago truncatula
Medtr2g088470 10.0kb upstream 10.0kb upstream 16603 true chr2: 37300036-37316638 Medicago truncatula
Medtr2g088470 10.0kb upstream 10.0kb upstream 10000 false chr2: 37306639-37316638 Medicago truncatula
Medtr2g088470 10.0kb downstream 10.0kb downstream 16603 true chr2: 37290036-37306638 Medicago truncatula
Medtr2g088470 10.0kb downstream 10.0kb downstream 10000 false chr2: 37290036-37300035 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314648 5265 Fabidae View MSA
124067525 5270 Rosid View MSA
123744207 5271 Pentapetalae View MSA
122795649 5272 Eudicot View MSA
122043712 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low Low
cufflinks 2.382        
cufflinks 1.93        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.005        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 1.932        
cufflinks 0.006     Low Low

0 Strain