Gene : Medtr2g090140 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10949:SF0 - LIPOYL SYNTHASE, MITOCHONDRIAL Description:  lipoyl synthase
Genomic Order:  4830 Name:  ? Medtr2g090140
Secondary Identifier:  ? PAC:31067118
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-501 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090140 0.5kb upstream 0.5kb upstream 5035 true chr2: 38225599-38230633 Medicago truncatula
Medtr2g090140 0.5kb upstream 0.5kb upstream 500 false chr2: 38225599-38226098 Medicago truncatula
Medtr2g090140 0.5kb downstream 0.5kb downstream 5035 true chr2: 38226099-38231133 Medicago truncatula
Medtr2g090140 0.5kb downstream 0.5kb downstream 500 false chr2: 38230634-38231133 Medicago truncatula
Medtr2g090140 1.0kb upstream 1.0kb upstream 5535 true chr2: 38225099-38230633 Medicago truncatula
Medtr2g090140 1.0kb upstream 1.0kb upstream 1000 false chr2: 38225099-38226098 Medicago truncatula
Medtr2g090140 1.0kb downstream 1.0kb downstream 5535 true chr2: 38226099-38231633 Medicago truncatula
Medtr2g090140 1.0kb downstream 1.0kb downstream 1000 false chr2: 38230634-38231633 Medicago truncatula
Medtr2g090140 2.0kb upstream 2.0kb upstream 6535 true chr2: 38224099-38230633 Medicago truncatula
Medtr2g090140 2.0kb upstream 2.0kb upstream 2000 false chr2: 38224099-38226098 Medicago truncatula
Medtr2g090140 2.0kb downstream 2.0kb downstream 6535 true chr2: 38226099-38232633 Medicago truncatula
Medtr2g090140 2.0kb downstream 2.0kb downstream 2000 false chr2: 38230634-38232633 Medicago truncatula
Medtr2g090140 5.0kb upstream 5.0kb upstream 9535 true chr2: 38221099-38230633 Medicago truncatula
Medtr2g090140 5.0kb upstream 5.0kb upstream 5000 false chr2: 38221099-38226098 Medicago truncatula
Medtr2g090140 5.0kb downstream 5.0kb downstream 9535 true chr2: 38226099-38235633 Medicago truncatula
Medtr2g090140 5.0kb downstream 5.0kb downstream 5000 false chr2: 38230634-38235633 Medicago truncatula
Medtr2g090140 10.0kb upstream 10.0kb upstream 14535 true chr2: 38216099-38230633 Medicago truncatula
Medtr2g090140 10.0kb upstream 10.0kb upstream 10000 false chr2: 38216099-38226098 Medicago truncatula
Medtr2g090140 10.0kb downstream 10.0kb downstream 14535 true chr2: 38226099-38240633 Medicago truncatula
Medtr2g090140 10.0kb downstream 10.0kb downstream 10000 false chr2: 38230634-38240633 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309062 5265 Fabidae View MSA
124060481 5270 Rosid View MSA
123740164 5271 Pentapetalae View MSA
122788424 5272 Eudicot View MSA
122045804 5273 Angiosperm View MSA
121345971 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.195        
cufflinks 17.241     High High
cufflinks 14.744     High  
cufflinks 8.586        
cufflinks 14.84     High  
cufflinks 3.228       Low
cufflinks 5.869        
cufflinks 14.929     High  
cufflinks 9.185        

0 Strain