Gene : Medtr2g090060 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.1.2.5//6.3.3.2 - Glutamate formimidoyltransferase / Glutamate formyltransferase // 5-formyltetrahydrofolate cyclo-ligase / Methenyl-THF synthetase Description:  formiminotransferase-cyclodeaminase-like protein
Genomic Order:  4817 Name:  ? Medtr2g090060
Secondary Identifier:  ? PAC:31069020
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090060 0.5kb upstream 0.5kb upstream 3611 true chr2: 38132643-38136253 Medicago truncatula
Medtr2g090060 0.5kb upstream 0.5kb upstream 500 false chr2: 38132643-38133142 Medicago truncatula
Medtr2g090060 0.5kb downstream 0.5kb downstream 3611 true chr2: 38133143-38136753 Medicago truncatula
Medtr2g090060 0.5kb downstream 0.5kb downstream 500 false chr2: 38136254-38136753 Medicago truncatula
Medtr2g090060 1.0kb upstream 1.0kb upstream 4111 true chr2: 38132143-38136253 Medicago truncatula
Medtr2g090060 1.0kb upstream 1.0kb upstream 1000 false chr2: 38132143-38133142 Medicago truncatula
Medtr2g090060 1.0kb downstream 1.0kb downstream 4111 true chr2: 38133143-38137253 Medicago truncatula
Medtr2g090060 1.0kb downstream 1.0kb downstream 1000 false chr2: 38136254-38137253 Medicago truncatula
Medtr2g090060 2.0kb upstream 2.0kb upstream 5111 true chr2: 38131143-38136253 Medicago truncatula
Medtr2g090060 2.0kb upstream 2.0kb upstream 2000 false chr2: 38131143-38133142 Medicago truncatula
Medtr2g090060 2.0kb downstream 2.0kb downstream 5111 true chr2: 38133143-38138253 Medicago truncatula
Medtr2g090060 2.0kb downstream 2.0kb downstream 2000 false chr2: 38136254-38138253 Medicago truncatula
Medtr2g090060 5.0kb upstream 5.0kb upstream 8111 true chr2: 38128143-38136253 Medicago truncatula
Medtr2g090060 5.0kb upstream 5.0kb upstream 5000 false chr2: 38128143-38133142 Medicago truncatula
Medtr2g090060 5.0kb downstream 5.0kb downstream 8111 true chr2: 38133143-38141253 Medicago truncatula
Medtr2g090060 5.0kb downstream 5.0kb downstream 5000 false chr2: 38136254-38141253 Medicago truncatula
Medtr2g090060 10.0kb upstream 10.0kb upstream 13111 true chr2: 38123143-38136253 Medicago truncatula
Medtr2g090060 10.0kb upstream 10.0kb upstream 10000 false chr2: 38123143-38133142 Medicago truncatula
Medtr2g090060 10.0kb downstream 10.0kb downstream 13111 true chr2: 38133143-38146253 Medicago truncatula
Medtr2g090060 10.0kb downstream 10.0kb downstream 10000 false chr2: 38136254-38146253 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306444 5265 Fabidae View MSA
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.116     High  
cufflinks 7.887        
cufflinks 7.556        
cufflinks 29.871     High High
cufflinks 6.071       Low
cufflinks 8.638        
cufflinks 22.736     High  
cufflinks 10.661     High  
cufflinks 34.113     High High

0 Strain