Gene : Medtr2g090055 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.1.2.5//6.3.3.2 - Glutamate formimidoyltransferase / Glutamate formyltransferase // 5-formyltetrahydrofolate cyclo-ligase / Methenyl-THF synthetase Description:  formiminotransferase-cyclodeaminase-like protein
Genomic Order:  4816 Name:  ? Medtr2g090055
Secondary Identifier:  ? PAC:31067151
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090055 0.5kb upstream 0.5kb upstream 3447 true chr2: 38127990-38131436 Medicago truncatula
Medtr2g090055 0.5kb upstream 0.5kb upstream 500 false chr2: 38127990-38128489 Medicago truncatula
Medtr2g090055 0.5kb downstream 0.5kb downstream 3447 true chr2: 38128490-38131936 Medicago truncatula
Medtr2g090055 0.5kb downstream 0.5kb downstream 500 false chr2: 38131437-38131936 Medicago truncatula
Medtr2g090055 1.0kb upstream 1.0kb upstream 3947 true chr2: 38127490-38131436 Medicago truncatula
Medtr2g090055 1.0kb upstream 1.0kb upstream 1000 false chr2: 38127490-38128489 Medicago truncatula
Medtr2g090055 1.0kb downstream 1.0kb downstream 3947 true chr2: 38128490-38132436 Medicago truncatula
Medtr2g090055 1.0kb downstream 1.0kb downstream 1000 false chr2: 38131437-38132436 Medicago truncatula
Medtr2g090055 2.0kb upstream 2.0kb upstream 4947 true chr2: 38126490-38131436 Medicago truncatula
Medtr2g090055 2.0kb upstream 2.0kb upstream 2000 false chr2: 38126490-38128489 Medicago truncatula
Medtr2g090055 2.0kb downstream 2.0kb downstream 4947 true chr2: 38128490-38133436 Medicago truncatula
Medtr2g090055 2.0kb downstream 2.0kb downstream 2000 false chr2: 38131437-38133436 Medicago truncatula
Medtr2g090055 5.0kb upstream 5.0kb upstream 7947 true chr2: 38123490-38131436 Medicago truncatula
Medtr2g090055 5.0kb upstream 5.0kb upstream 5000 false chr2: 38123490-38128489 Medicago truncatula
Medtr2g090055 5.0kb downstream 5.0kb downstream 7947 true chr2: 38128490-38136436 Medicago truncatula
Medtr2g090055 5.0kb downstream 5.0kb downstream 5000 false chr2: 38131437-38136436 Medicago truncatula
Medtr2g090055 10.0kb upstream 10.0kb upstream 12947 true chr2: 38118490-38131436 Medicago truncatula
Medtr2g090055 10.0kb upstream 10.0kb upstream 10000 false chr2: 38118490-38128489 Medicago truncatula
Medtr2g090055 10.0kb downstream 10.0kb downstream 12947 true chr2: 38128490-38141436 Medicago truncatula
Medtr2g090055 10.0kb downstream 10.0kb downstream 10000 false chr2: 38131437-38141436 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310861 5265 Fabidae View MSA
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.972        
cufflinks 6.145       High
cufflinks 4.457        
cufflinks 0.172       Low
cufflinks 7.127       High
cufflinks 0.124     Low Low
cufflinks 0.868        
cufflinks 4.486        
cufflinks 0.588        

0 Strain