Gene : Medtr2g090050 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF04484 - Family of unknown function (DUF566) (DUF566) Description:  DUF566 family protein
Genomic Order:  4815 Name:  ? Medtr2g090050
Secondary Identifier:  ? PAC:31062981
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090050 0.5kb upstream 0.5kb upstream 3226 true chr2: 38123248-38126473 Medicago truncatula
Medtr2g090050 0.5kb upstream 0.5kb upstream 500 false chr2: 38123248-38123747 Medicago truncatula
Medtr2g090050 0.5kb downstream 0.5kb downstream 3226 true chr2: 38123748-38126973 Medicago truncatula
Medtr2g090050 0.5kb downstream 0.5kb downstream 500 false chr2: 38126474-38126973 Medicago truncatula
Medtr2g090050 1.0kb upstream 1.0kb upstream 3726 true chr2: 38122748-38126473 Medicago truncatula
Medtr2g090050 1.0kb upstream 1.0kb upstream 1000 false chr2: 38122748-38123747 Medicago truncatula
Medtr2g090050 1.0kb downstream 1.0kb downstream 3726 true chr2: 38123748-38127473 Medicago truncatula
Medtr2g090050 1.0kb downstream 1.0kb downstream 1000 false chr2: 38126474-38127473 Medicago truncatula
Medtr2g090050 2.0kb upstream 2.0kb upstream 4726 true chr2: 38121748-38126473 Medicago truncatula
Medtr2g090050 2.0kb upstream 2.0kb upstream 2000 false chr2: 38121748-38123747 Medicago truncatula
Medtr2g090050 2.0kb downstream 2.0kb downstream 4726 true chr2: 38123748-38128473 Medicago truncatula
Medtr2g090050 2.0kb downstream 2.0kb downstream 2000 false chr2: 38126474-38128473 Medicago truncatula
Medtr2g090050 5.0kb upstream 5.0kb upstream 7726 true chr2: 38118748-38126473 Medicago truncatula
Medtr2g090050 5.0kb upstream 5.0kb upstream 5000 false chr2: 38118748-38123747 Medicago truncatula
Medtr2g090050 5.0kb downstream 5.0kb downstream 7726 true chr2: 38123748-38131473 Medicago truncatula
Medtr2g090050 5.0kb downstream 5.0kb downstream 5000 false chr2: 38126474-38131473 Medicago truncatula
Medtr2g090050 10.0kb upstream 10.0kb upstream 12726 true chr2: 38113748-38126473 Medicago truncatula
Medtr2g090050 10.0kb upstream 10.0kb upstream 10000 false chr2: 38113748-38123747 Medicago truncatula
Medtr2g090050 10.0kb downstream 10.0kb downstream 12726 true chr2: 38123748-38136473 Medicago truncatula
Medtr2g090050 10.0kb downstream 10.0kb downstream 10000 false chr2: 38126474-38136473 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026460 5273 Angiosperm View MSA
122301958 5265 Fabidae View MSA
124067375 5270 Rosid View MSA
123749787 5271 Pentapetalae View MSA
122794883 5272 Eudicot View MSA
121296342 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.122       High
cufflinks 0.334        
cufflinks 0.364        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.877        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071     Low Low
cufflinks 0.52        
cufflinks 0.057     Low Low

0 Strain