Gene : Medtr2g089925 M. truncatula Mt4.0v1
Defline:  (1 of 22) PF12609 - Wound-induced protein (DUF3774) Description:  wound-responsive family protein
Genomic Order:  4796 Name:  ? Medtr2g089925
Secondary Identifier:  ? PAC:31065066
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g089925 0.5kb upstream 0.5kb upstream 1028 true chr2: 38021262-38022289 Medicago truncatula
Medtr2g089925 0.5kb upstream 0.5kb upstream 500 false chr2: 38021262-38021761 Medicago truncatula
Medtr2g089925 0.5kb downstream 0.5kb downstream 1028 true chr2: 38021762-38022789 Medicago truncatula
Medtr2g089925 0.5kb downstream 0.5kb downstream 500 false chr2: 38022290-38022789 Medicago truncatula
Medtr2g089925 1.0kb upstream 1.0kb upstream 1528 true chr2: 38020762-38022289 Medicago truncatula
Medtr2g089925 1.0kb upstream 1.0kb upstream 1000 false chr2: 38020762-38021761 Medicago truncatula
Medtr2g089925 1.0kb downstream 1.0kb downstream 1528 true chr2: 38021762-38023289 Medicago truncatula
Medtr2g089925 1.0kb downstream 1.0kb downstream 1000 false chr2: 38022290-38023289 Medicago truncatula
Medtr2g089925 2.0kb upstream 2.0kb upstream 2528 true chr2: 38019762-38022289 Medicago truncatula
Medtr2g089925 2.0kb upstream 2.0kb upstream 2000 false chr2: 38019762-38021761 Medicago truncatula
Medtr2g089925 2.0kb downstream 2.0kb downstream 2528 true chr2: 38021762-38024289 Medicago truncatula
Medtr2g089925 2.0kb downstream 2.0kb downstream 2000 false chr2: 38022290-38024289 Medicago truncatula
Medtr2g089925 5.0kb upstream 5.0kb upstream 5528 true chr2: 38016762-38022289 Medicago truncatula
Medtr2g089925 5.0kb upstream 5.0kb upstream 5000 false chr2: 38016762-38021761 Medicago truncatula
Medtr2g089925 5.0kb downstream 5.0kb downstream 5528 true chr2: 38021762-38027289 Medicago truncatula
Medtr2g089925 5.0kb downstream 5.0kb downstream 5000 false chr2: 38022290-38027289 Medicago truncatula
Medtr2g089925 10.0kb upstream 10.0kb upstream 10528 true chr2: 38011762-38022289 Medicago truncatula
Medtr2g089925 10.0kb upstream 10.0kb upstream 10000 false chr2: 38011762-38021761 Medicago truncatula
Medtr2g089925 10.0kb downstream 10.0kb downstream 10528 true chr2: 38021762-38032289 Medicago truncatula
Medtr2g089925 10.0kb downstream 10.0kb downstream 10000 false chr2: 38022290-38032289 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314984 5265 Fabidae View MSA
124074460 5270 Rosid View MSA
123752269 5271 Pentapetalae View MSA
122786865 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.144     High  
cufflinks 10.794     High  
cufflinks 7.94        
cufflinks 11.5     High  
cufflinks 6.287        
cufflinks 4.682       Low
cufflinks 31.917     High High
cufflinks 8.012        
cufflinks 32.882     High High

0 Strain