Gene : Medtr2g090390 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31451:SF1 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Description:  glycoside hydrolase family 5 protein
Genomic Order:  4874 Name:  ? Medtr2g090390
Secondary Identifier:  ? PAC:31068381
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090390 0.5kb upstream 0.5kb upstream 5500 true chr2: 38517673-38523172 Medicago truncatula
Medtr2g090390 0.5kb upstream 0.5kb upstream 500 false chr2: 38522673-38523172 Medicago truncatula
Medtr2g090390 0.5kb downstream 0.5kb downstream 5500 true chr2: 38517173-38522672 Medicago truncatula
Medtr2g090390 0.5kb downstream 0.5kb downstream 500 false chr2: 38517173-38517672 Medicago truncatula
Medtr2g090390 1.0kb upstream 1.0kb upstream 6000 true chr2: 38517673-38523672 Medicago truncatula
Medtr2g090390 1.0kb upstream 1.0kb upstream 1000 false chr2: 38522673-38523672 Medicago truncatula
Medtr2g090390 1.0kb downstream 1.0kb downstream 6000 true chr2: 38516673-38522672 Medicago truncatula
Medtr2g090390 1.0kb downstream 1.0kb downstream 1000 false chr2: 38516673-38517672 Medicago truncatula
Medtr2g090390 2.0kb upstream 2.0kb upstream 7000 true chr2: 38517673-38524672 Medicago truncatula
Medtr2g090390 2.0kb upstream 2.0kb upstream 2000 false chr2: 38522673-38524672 Medicago truncatula
Medtr2g090390 2.0kb downstream 2.0kb downstream 7000 true chr2: 38515673-38522672 Medicago truncatula
Medtr2g090390 2.0kb downstream 2.0kb downstream 2000 false chr2: 38515673-38517672 Medicago truncatula
Medtr2g090390 5.0kb upstream 5.0kb upstream 10000 true chr2: 38517673-38527672 Medicago truncatula
Medtr2g090390 5.0kb upstream 5.0kb upstream 5000 false chr2: 38522673-38527672 Medicago truncatula
Medtr2g090390 5.0kb downstream 5.0kb downstream 10000 true chr2: 38512673-38522672 Medicago truncatula
Medtr2g090390 5.0kb downstream 5.0kb downstream 5000 false chr2: 38512673-38517672 Medicago truncatula
Medtr2g090390 10.0kb upstream 10.0kb upstream 15000 true chr2: 38517673-38532672 Medicago truncatula
Medtr2g090390 10.0kb upstream 10.0kb upstream 10000 false chr2: 38522673-38532672 Medicago truncatula
Medtr2g090390 10.0kb downstream 10.0kb downstream 15000 true chr2: 38507673-38522672 Medicago truncatula
Medtr2g090390 10.0kb downstream 10.0kb downstream 10000 false chr2: 38507673-38517672 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314019 5265 Fabidae View MSA
124068512 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.004        
cufflinks 3.81        
cufflinks 4.894       High
cufflinks 0.557       Low
cufflinks 5.771       High
cufflinks 0.58       Low
cufflinks 1.783        
cufflinks 3.966        
cufflinks 1.53        

0 Strain