Gene : Medtr2g090455 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  4881
Name:  ? Medtr2g090455 Secondary Identifier:  ? PAC:31064271
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090455 0.5kb upstream 0.5kb upstream 2587 true chr2: 38587275-38589861 Medicago truncatula
Medtr2g090455 0.5kb upstream 0.5kb upstream 500 false chr2: 38587275-38587774 Medicago truncatula
Medtr2g090455 0.5kb downstream 0.5kb downstream 2587 true chr2: 38587775-38590361 Medicago truncatula
Medtr2g090455 0.5kb downstream 0.5kb downstream 500 false chr2: 38589862-38590361 Medicago truncatula
Medtr2g090455 1.0kb upstream 1.0kb upstream 3087 true chr2: 38586775-38589861 Medicago truncatula
Medtr2g090455 1.0kb upstream 1.0kb upstream 1000 false chr2: 38586775-38587774 Medicago truncatula
Medtr2g090455 1.0kb downstream 1.0kb downstream 3087 true chr2: 38587775-38590861 Medicago truncatula
Medtr2g090455 1.0kb downstream 1.0kb downstream 1000 false chr2: 38589862-38590861 Medicago truncatula
Medtr2g090455 2.0kb upstream 2.0kb upstream 4087 true chr2: 38585775-38589861 Medicago truncatula
Medtr2g090455 2.0kb upstream 2.0kb upstream 2000 false chr2: 38585775-38587774 Medicago truncatula
Medtr2g090455 2.0kb downstream 2.0kb downstream 4087 true chr2: 38587775-38591861 Medicago truncatula
Medtr2g090455 2.0kb downstream 2.0kb downstream 2000 false chr2: 38589862-38591861 Medicago truncatula
Medtr2g090455 5.0kb upstream 5.0kb upstream 7087 true chr2: 38582775-38589861 Medicago truncatula
Medtr2g090455 5.0kb upstream 5.0kb upstream 5000 false chr2: 38582775-38587774 Medicago truncatula
Medtr2g090455 5.0kb downstream 5.0kb downstream 7087 true chr2: 38587775-38594861 Medicago truncatula
Medtr2g090455 5.0kb downstream 5.0kb downstream 5000 false chr2: 38589862-38594861 Medicago truncatula
Medtr2g090455 10.0kb upstream 10.0kb upstream 12087 true chr2: 38577775-38589861 Medicago truncatula
Medtr2g090455 10.0kb upstream 10.0kb upstream 10000 false chr2: 38577775-38587774 Medicago truncatula
Medtr2g090455 10.0kb downstream 10.0kb downstream 12087 true chr2: 38587775-38599861 Medicago truncatula
Medtr2g090455 10.0kb downstream 10.0kb downstream 10000 false chr2: 38589862-38599861 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121620536 5273 Angiosperm Singleton cluster - no MSA
122257979 5265 Fabidae Singleton cluster - no MSA
123999507 5270 Rosid Singleton cluster - no MSA
123573769 5271 Pentapetalae Singleton cluster - no MSA
122608489 5272 Eudicot Singleton cluster - no MSA
120892640 5274 Embryophyte Singleton cluster - no MSA
122933295 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.964        
cufflinks 0.288       Low
cufflinks 0.795        
cufflinks 4.869       High
cufflinks 0.467        
cufflinks 12.507     High High
cufflinks 1.618        
cufflinks 0.475        
cufflinks 2.965        

0 Strain