Gene : Medtr2g090270 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31692:SF5 - EXPANSIN-B1-RELATED Description:  expansin-like protein B1
Genomic Order:  4853 Name:  ? Medtr2g090270
Secondary Identifier:  ? PAC:31068056
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090270 0.5kb upstream 0.5kb upstream 3046 true chr2: 38369376-38372421 Medicago truncatula
Medtr2g090270 0.5kb upstream 0.5kb upstream 500 false chr2: 38371922-38372421 Medicago truncatula
Medtr2g090270 0.5kb downstream 0.5kb downstream 3046 true chr2: 38368876-38371921 Medicago truncatula
Medtr2g090270 0.5kb downstream 0.5kb downstream 500 false chr2: 38368876-38369375 Medicago truncatula
Medtr2g090270 1.0kb upstream 1.0kb upstream 3546 true chr2: 38369376-38372921 Medicago truncatula
Medtr2g090270 1.0kb upstream 1.0kb upstream 1000 false chr2: 38371922-38372921 Medicago truncatula
Medtr2g090270 1.0kb downstream 1.0kb downstream 3546 true chr2: 38368376-38371921 Medicago truncatula
Medtr2g090270 1.0kb downstream 1.0kb downstream 1000 false chr2: 38368376-38369375 Medicago truncatula
Medtr2g090270 2.0kb upstream 2.0kb upstream 4546 true chr2: 38369376-38373921 Medicago truncatula
Medtr2g090270 2.0kb upstream 2.0kb upstream 2000 false chr2: 38371922-38373921 Medicago truncatula
Medtr2g090270 2.0kb downstream 2.0kb downstream 4546 true chr2: 38367376-38371921 Medicago truncatula
Medtr2g090270 2.0kb downstream 2.0kb downstream 2000 false chr2: 38367376-38369375 Medicago truncatula
Medtr2g090270 5.0kb upstream 5.0kb upstream 7546 true chr2: 38369376-38376921 Medicago truncatula
Medtr2g090270 5.0kb upstream 5.0kb upstream 5000 false chr2: 38371922-38376921 Medicago truncatula
Medtr2g090270 5.0kb downstream 5.0kb downstream 7546 true chr2: 38364376-38371921 Medicago truncatula
Medtr2g090270 5.0kb downstream 5.0kb downstream 5000 false chr2: 38364376-38369375 Medicago truncatula
Medtr2g090270 10.0kb upstream 10.0kb upstream 12546 true chr2: 38369376-38381921 Medicago truncatula
Medtr2g090270 10.0kb upstream 10.0kb upstream 10000 false chr2: 38371922-38381921 Medicago truncatula
Medtr2g090270 10.0kb downstream 10.0kb downstream 12546 true chr2: 38359376-38371921 Medicago truncatula
Medtr2g090270 10.0kb downstream 10.0kb downstream 10000 false chr2: 38359376-38369375 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040952 5273 Angiosperm View MSA
122296571 5265 Fabidae View MSA
124061780 5270 Rosid View MSA
123742041 5271 Pentapetalae View MSA
122787625 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121351768 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.029     Low Low
cufflinks 0.193        
cufflinks 0.45        
cufflinks 0.073        
cufflinks 1.622       High
cufflinks 0.216        
cufflinks 0.097        
cufflinks 0.311        
cufflinks 0.22        

0 Strain