Gene : Medtr2g090190 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Description:  catalytic/protein phosphatase type 2C
Genomic Order:  4839 Name:  ? Medtr2g090190
Secondary Identifier:  ? PAC:31066143
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g090190 0.5kb upstream 0.5kb upstream 4241 true chr2: 38268711-38272951 Medicago truncatula
Medtr2g090190 0.5kb upstream 0.5kb upstream 500 false chr2: 38272452-38272951 Medicago truncatula
Medtr2g090190 0.5kb downstream 0.5kb downstream 4241 true chr2: 38268211-38272451 Medicago truncatula
Medtr2g090190 0.5kb downstream 0.5kb downstream 500 false chr2: 38268211-38268710 Medicago truncatula
Medtr2g090190 1.0kb upstream 1.0kb upstream 4741 true chr2: 38268711-38273451 Medicago truncatula
Medtr2g090190 1.0kb upstream 1.0kb upstream 1000 false chr2: 38272452-38273451 Medicago truncatula
Medtr2g090190 1.0kb downstream 1.0kb downstream 4741 true chr2: 38267711-38272451 Medicago truncatula
Medtr2g090190 1.0kb downstream 1.0kb downstream 1000 false chr2: 38267711-38268710 Medicago truncatula
Medtr2g090190 2.0kb upstream 2.0kb upstream 5741 true chr2: 38268711-38274451 Medicago truncatula
Medtr2g090190 2.0kb upstream 2.0kb upstream 2000 false chr2: 38272452-38274451 Medicago truncatula
Medtr2g090190 2.0kb downstream 2.0kb downstream 5741 true chr2: 38266711-38272451 Medicago truncatula
Medtr2g090190 2.0kb downstream 2.0kb downstream 2000 false chr2: 38266711-38268710 Medicago truncatula
Medtr2g090190 5.0kb upstream 5.0kb upstream 8741 true chr2: 38268711-38277451 Medicago truncatula
Medtr2g090190 5.0kb upstream 5.0kb upstream 5000 false chr2: 38272452-38277451 Medicago truncatula
Medtr2g090190 5.0kb downstream 5.0kb downstream 8741 true chr2: 38263711-38272451 Medicago truncatula
Medtr2g090190 5.0kb downstream 5.0kb downstream 5000 false chr2: 38263711-38268710 Medicago truncatula
Medtr2g090190 10.0kb upstream 10.0kb upstream 13741 true chr2: 38268711-38282451 Medicago truncatula
Medtr2g090190 10.0kb upstream 10.0kb upstream 10000 false chr2: 38272452-38282451 Medicago truncatula
Medtr2g090190 10.0kb downstream 10.0kb downstream 13741 true chr2: 38258711-38272451 Medicago truncatula
Medtr2g090190 10.0kb downstream 10.0kb downstream 10000 false chr2: 38258711-38268710 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
122288193 5265 Fabidae View MSA
124038359 5270 Rosid View MSA
123739469 5271 Pentapetalae View MSA
122786449 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.371        
cufflinks 5.309        
cufflinks 15.815     High High
cufflinks 1.606        
cufflinks 5.856        
cufflinks 1.036       Low
cufflinks 1.985        
cufflinks 8.622       High
cufflinks 2.141        

0 Strain