Gene : Medtr2g080210 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF00009//PF03143 - Elongation factor Tu GTP binding domain (GTP_EFTU) // Elongation factor Tu C-terminal domain (GTP_EFTU_D3) Description:  elongation factor 1-alpha-like protein
Genomic Order:  4223 Name:  ? Medtr2g080210
Secondary Identifier:  ? PAC:31067517
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g080210 0.5kb upstream 0.5kb upstream 2155 true chr2: 33859867-33862021 Medicago truncatula
Medtr2g080210 0.5kb upstream 0.5kb upstream 500 false chr2: 33861522-33862021 Medicago truncatula
Medtr2g080210 0.5kb downstream 0.5kb downstream 2155 true chr2: 33859367-33861521 Medicago truncatula
Medtr2g080210 0.5kb downstream 0.5kb downstream 500 false chr2: 33859367-33859866 Medicago truncatula
Medtr2g080210 1.0kb upstream 1.0kb upstream 2655 true chr2: 33859867-33862521 Medicago truncatula
Medtr2g080210 1.0kb upstream 1.0kb upstream 1000 false chr2: 33861522-33862521 Medicago truncatula
Medtr2g080210 1.0kb downstream 1.0kb downstream 2655 true chr2: 33858867-33861521 Medicago truncatula
Medtr2g080210 1.0kb downstream 1.0kb downstream 1000 false chr2: 33858867-33859866 Medicago truncatula
Medtr2g080210 2.0kb upstream 2.0kb upstream 3655 true chr2: 33859867-33863521 Medicago truncatula
Medtr2g080210 2.0kb upstream 2.0kb upstream 2000 false chr2: 33861522-33863521 Medicago truncatula
Medtr2g080210 2.0kb downstream 2.0kb downstream 3655 true chr2: 33857867-33861521 Medicago truncatula
Medtr2g080210 2.0kb downstream 2.0kb downstream 2000 false chr2: 33857867-33859866 Medicago truncatula
Medtr2g080210 5.0kb upstream 5.0kb upstream 6655 true chr2: 33859867-33866521 Medicago truncatula
Medtr2g080210 5.0kb upstream 5.0kb upstream 5000 false chr2: 33861522-33866521 Medicago truncatula
Medtr2g080210 5.0kb downstream 5.0kb downstream 6655 true chr2: 33854867-33861521 Medicago truncatula
Medtr2g080210 5.0kb downstream 5.0kb downstream 5000 false chr2: 33854867-33859866 Medicago truncatula
Medtr2g080210 10.0kb upstream 10.0kb upstream 11655 true chr2: 33859867-33871521 Medicago truncatula
Medtr2g080210 10.0kb upstream 10.0kb upstream 10000 false chr2: 33861522-33871521 Medicago truncatula
Medtr2g080210 10.0kb downstream 10.0kb downstream 11655 true chr2: 33849867-33861521 Medicago truncatula
Medtr2g080210 10.0kb downstream 10.0kb downstream 10000 false chr2: 33849867-33859866 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658596 5273 Angiosperm View MSA
122258796 5265 Fabidae Singleton cluster - no MSA
124042687 5270 Rosid View MSA
123612885 5271 Pentapetalae View MSA
122647365 5272 Eudicot View MSA
121350954 5274 Embryophyte View MSA
123423923 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.064     Low  
cufflinks 0.017     Low  
cufflinks 0.009     Low Low
cufflinks 0.027     Low  
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.08        
cufflinks 0.013     Low  
cufflinks 0.211       High

0 Strain