Gene : Medtr2g079850 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31008:SF4 - COP1-INTERACTING PROTEIN 7 (CIP7) Description:  COP1-interacting protein, putative
Genomic Order:  4205 Name:  ? Medtr2g079850
Secondary Identifier:  ? PAC:31064580
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g079850 0.5kb upstream 0.5kb upstream 6362 true chr2: 33652236-33658597 Medicago truncatula
Medtr2g079850 0.5kb upstream 0.5kb upstream 500 false chr2: 33658098-33658597 Medicago truncatula
Medtr2g079850 0.5kb downstream 0.5kb downstream 6362 true chr2: 33651736-33658097 Medicago truncatula
Medtr2g079850 0.5kb downstream 0.5kb downstream 500 false chr2: 33651736-33652235 Medicago truncatula
Medtr2g079850 1.0kb upstream 1.0kb upstream 6862 true chr2: 33652236-33659097 Medicago truncatula
Medtr2g079850 1.0kb upstream 1.0kb upstream 1000 false chr2: 33658098-33659097 Medicago truncatula
Medtr2g079850 1.0kb downstream 1.0kb downstream 6862 true chr2: 33651236-33658097 Medicago truncatula
Medtr2g079850 1.0kb downstream 1.0kb downstream 1000 false chr2: 33651236-33652235 Medicago truncatula
Medtr2g079850 2.0kb upstream 2.0kb upstream 7862 true chr2: 33652236-33660097 Medicago truncatula
Medtr2g079850 2.0kb upstream 2.0kb upstream 2000 false chr2: 33658098-33660097 Medicago truncatula
Medtr2g079850 2.0kb downstream 2.0kb downstream 7862 true chr2: 33650236-33658097 Medicago truncatula
Medtr2g079850 2.0kb downstream 2.0kb downstream 2000 false chr2: 33650236-33652235 Medicago truncatula
Medtr2g079850 5.0kb upstream 5.0kb upstream 10862 true chr2: 33652236-33663097 Medicago truncatula
Medtr2g079850 5.0kb upstream 5.0kb upstream 5000 false chr2: 33658098-33663097 Medicago truncatula
Medtr2g079850 5.0kb downstream 5.0kb downstream 10862 true chr2: 33647236-33658097 Medicago truncatula
Medtr2g079850 5.0kb downstream 5.0kb downstream 5000 false chr2: 33647236-33652235 Medicago truncatula
Medtr2g079850 10.0kb upstream 10.0kb upstream 15862 true chr2: 33652236-33668097 Medicago truncatula
Medtr2g079850 10.0kb upstream 10.0kb upstream 10000 false chr2: 33658098-33668097 Medicago truncatula
Medtr2g079850 10.0kb downstream 10.0kb downstream 15862 true chr2: 33642236-33658097 Medicago truncatula
Medtr2g079850 10.0kb downstream 10.0kb downstream 10000 false chr2: 33642236-33652235 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302091 5265 Fabidae View MSA
124068447 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low Low
cufflinks 0.664        
cufflinks 0.54        
cufflinks 0.207        
cufflinks 1.06        
cufflinks 0.38        
cufflinks 0.314        
cufflinks 0.549        
cufflinks 0.715        

0 Strain