Gene : Medtr2g079700 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12736//PTHR12736:SF13 - LANC-LIKE PROTEIN Description:  G protein coupled receptor
Genomic Order:  4193 Name:  ? Medtr2g079700
Secondary Identifier:  ? PAC:31066263
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g079700 0.5kb upstream 0.5kb upstream 3616 true chr2: 33575656-33579271 Medicago truncatula
Medtr2g079700 0.5kb upstream 0.5kb upstream 500 false chr2: 33575656-33576155 Medicago truncatula
Medtr2g079700 0.5kb downstream 0.5kb downstream 3616 true chr2: 33576156-33579771 Medicago truncatula
Medtr2g079700 0.5kb downstream 0.5kb downstream 500 false chr2: 33579272-33579771 Medicago truncatula
Medtr2g079700 1.0kb upstream 1.0kb upstream 4116 true chr2: 33575156-33579271 Medicago truncatula
Medtr2g079700 1.0kb upstream 1.0kb upstream 1000 false chr2: 33575156-33576155 Medicago truncatula
Medtr2g079700 1.0kb downstream 1.0kb downstream 4116 true chr2: 33576156-33580271 Medicago truncatula
Medtr2g079700 1.0kb downstream 1.0kb downstream 1000 false chr2: 33579272-33580271 Medicago truncatula
Medtr2g079700 2.0kb upstream 2.0kb upstream 5116 true chr2: 33574156-33579271 Medicago truncatula
Medtr2g079700 2.0kb upstream 2.0kb upstream 2000 false chr2: 33574156-33576155 Medicago truncatula
Medtr2g079700 2.0kb downstream 2.0kb downstream 5116 true chr2: 33576156-33581271 Medicago truncatula
Medtr2g079700 2.0kb downstream 2.0kb downstream 2000 false chr2: 33579272-33581271 Medicago truncatula
Medtr2g079700 5.0kb upstream 5.0kb upstream 8116 true chr2: 33571156-33579271 Medicago truncatula
Medtr2g079700 5.0kb upstream 5.0kb upstream 5000 false chr2: 33571156-33576155 Medicago truncatula
Medtr2g079700 5.0kb downstream 5.0kb downstream 8116 true chr2: 33576156-33584271 Medicago truncatula
Medtr2g079700 5.0kb downstream 5.0kb downstream 5000 false chr2: 33579272-33584271 Medicago truncatula
Medtr2g079700 10.0kb upstream 10.0kb upstream 13116 true chr2: 33566156-33579271 Medicago truncatula
Medtr2g079700 10.0kb upstream 10.0kb upstream 10000 false chr2: 33566156-33576155 Medicago truncatula
Medtr2g079700 10.0kb downstream 10.0kb downstream 13116 true chr2: 33576156-33589271 Medicago truncatula
Medtr2g079700 10.0kb downstream 10.0kb downstream 10000 false chr2: 33579272-33589271 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304685 5265 Fabidae View MSA
124065113 5270 Rosid View MSA
123737530 5271 Pentapetalae View MSA
122788012 5272 Eudicot View MSA
122042680 5273 Angiosperm View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.386       High
cufflinks 0.58        
cufflinks 0.819        
cufflinks 0.312        
cufflinks 1.052        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.299        
cufflinks 0.691        
cufflinks 0.239       Low

0 Strain