Gene : Medtr2g079610 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22870:SF209 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Description:  chromosome condensation regulator RCC1 repeat protein
Genomic Order:  4189 Name:  ? Medtr2g079610
Secondary Identifier:  ? PAC:31065105
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g079610 0.5kb upstream 0.5kb upstream 7211 true chr2: 33529223-33536433 Medicago truncatula
Medtr2g079610 0.5kb upstream 0.5kb upstream 500 false chr2: 33529223-33529722 Medicago truncatula
Medtr2g079610 0.5kb downstream 0.5kb downstream 7211 true chr2: 33529723-33536933 Medicago truncatula
Medtr2g079610 0.5kb downstream 0.5kb downstream 500 false chr2: 33536434-33536933 Medicago truncatula
Medtr2g079610 1.0kb upstream 1.0kb upstream 7711 true chr2: 33528723-33536433 Medicago truncatula
Medtr2g079610 1.0kb upstream 1.0kb upstream 1000 false chr2: 33528723-33529722 Medicago truncatula
Medtr2g079610 1.0kb downstream 1.0kb downstream 7711 true chr2: 33529723-33537433 Medicago truncatula
Medtr2g079610 1.0kb downstream 1.0kb downstream 1000 false chr2: 33536434-33537433 Medicago truncatula
Medtr2g079610 2.0kb upstream 2.0kb upstream 8711 true chr2: 33527723-33536433 Medicago truncatula
Medtr2g079610 2.0kb upstream 2.0kb upstream 2000 false chr2: 33527723-33529722 Medicago truncatula
Medtr2g079610 2.0kb downstream 2.0kb downstream 8711 true chr2: 33529723-33538433 Medicago truncatula
Medtr2g079610 2.0kb downstream 2.0kb downstream 2000 false chr2: 33536434-33538433 Medicago truncatula
Medtr2g079610 5.0kb upstream 5.0kb upstream 11711 true chr2: 33524723-33536433 Medicago truncatula
Medtr2g079610 5.0kb upstream 5.0kb upstream 5000 false chr2: 33524723-33529722 Medicago truncatula
Medtr2g079610 5.0kb downstream 5.0kb downstream 11711 true chr2: 33529723-33541433 Medicago truncatula
Medtr2g079610 5.0kb downstream 5.0kb downstream 5000 false chr2: 33536434-33541433 Medicago truncatula
Medtr2g079610 10.0kb upstream 10.0kb upstream 16711 true chr2: 33519723-33536433 Medicago truncatula
Medtr2g079610 10.0kb upstream 10.0kb upstream 10000 false chr2: 33519723-33529722 Medicago truncatula
Medtr2g079610 10.0kb downstream 10.0kb downstream 16711 true chr2: 33529723-33546433 Medicago truncatula
Medtr2g079610 10.0kb downstream 10.0kb downstream 10000 false chr2: 33536434-33546433 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041443 5273 Angiosperm View MSA
122299269 5265 Fabidae View MSA
124063197 5270 Rosid View MSA
123736907 5271 Pentapetalae View MSA
122790897 5272 Eudicot View MSA
121345963 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.318        
cufflinks 3.504        
cufflinks 3.629        
cufflinks 0.966        
cufflinks 4.462       High
cufflinks 0.585       Low
cufflinks 1.675        
cufflinks 2.953        
cufflinks 1.038        

0 Strain