Gene : Medtr2g081180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00627//PF02148//PF13423 - UBA/TS-N domain (UBA) // Zn-finger in ubiquitin-hydrolases and other protein (zf-UBP) // Ubiquitin carboxyl-terminal hydrolase (UCH_1) Description:  ubiquitin carboxyl-terminal hydrolase
Genomic Order:  4254 Name:  ? Medtr2g081180
Secondary Identifier:  ? PAC:31064381
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g081180 0.5kb upstream 0.5kb upstream 9726 true chr2: 34046800-34056525 Medicago truncatula
Medtr2g081180 0.5kb upstream 0.5kb upstream 500 false chr2: 34056026-34056525 Medicago truncatula
Medtr2g081180 0.5kb downstream 0.5kb downstream 9726 true chr2: 34046300-34056025 Medicago truncatula
Medtr2g081180 0.5kb downstream 0.5kb downstream 500 false chr2: 34046300-34046799 Medicago truncatula
Medtr2g081180 1.0kb upstream 1.0kb upstream 10226 true chr2: 34046800-34057025 Medicago truncatula
Medtr2g081180 1.0kb upstream 1.0kb upstream 1000 false chr2: 34056026-34057025 Medicago truncatula
Medtr2g081180 1.0kb downstream 1.0kb downstream 10226 true chr2: 34045800-34056025 Medicago truncatula
Medtr2g081180 1.0kb downstream 1.0kb downstream 1000 false chr2: 34045800-34046799 Medicago truncatula
Medtr2g081180 2.0kb upstream 2.0kb upstream 11226 true chr2: 34046800-34058025 Medicago truncatula
Medtr2g081180 2.0kb upstream 2.0kb upstream 2000 false chr2: 34056026-34058025 Medicago truncatula
Medtr2g081180 2.0kb downstream 2.0kb downstream 11226 true chr2: 34044800-34056025 Medicago truncatula
Medtr2g081180 2.0kb downstream 2.0kb downstream 2000 false chr2: 34044800-34046799 Medicago truncatula
Medtr2g081180 5.0kb upstream 5.0kb upstream 14226 true chr2: 34046800-34061025 Medicago truncatula
Medtr2g081180 5.0kb upstream 5.0kb upstream 5000 false chr2: 34056026-34061025 Medicago truncatula
Medtr2g081180 5.0kb downstream 5.0kb downstream 14226 true chr2: 34041800-34056025 Medicago truncatula
Medtr2g081180 5.0kb downstream 5.0kb downstream 5000 false chr2: 34041800-34046799 Medicago truncatula
Medtr2g081180 10.0kb upstream 10.0kb upstream 19226 true chr2: 34046800-34066025 Medicago truncatula
Medtr2g081180 10.0kb upstream 10.0kb upstream 10000 false chr2: 34056026-34066025 Medicago truncatula
Medtr2g081180 10.0kb downstream 10.0kb downstream 19226 true chr2: 34036800-34056025 Medicago truncatula
Medtr2g081180 10.0kb downstream 10.0kb downstream 10000 false chr2: 34036800-34046799 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300245 5265 Fabidae View MSA
124064180 5270 Rosid View MSA
123745589 5271 Pentapetalae View MSA
122786484 5272 Eudicot View MSA
122048085 5273 Angiosperm View MSA
121345286 5274 Embryophyte View MSA
123424236 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.381        
cufflinks 1.394        
cufflinks 2.876       High
cufflinks 0.716        
cufflinks 1.784        
cufflinks 0.369       Low
cufflinks 1.012        
cufflinks 1.628        
cufflinks 1.281        

0 Strain