Gene : Medtr2g081080 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR14927:SF0 - NUCLEOLAR PROTEIN 10 Description:  embryo sac development arrest protein
Genomic Order:  4243 Name:  ? Medtr2g081080
Secondary Identifier:  ? PAC:31064003
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g081080 0.5kb upstream 0.5kb upstream 11726 true chr2: 33979906-33991631 Medicago truncatula
Medtr2g081080 0.5kb upstream 0.5kb upstream 500 false chr2: 33979906-33980405 Medicago truncatula
Medtr2g081080 0.5kb downstream 0.5kb downstream 11726 true chr2: 33980406-33992131 Medicago truncatula
Medtr2g081080 0.5kb downstream 0.5kb downstream 500 false chr2: 33991632-33992131 Medicago truncatula
Medtr2g081080 1.0kb upstream 1.0kb upstream 12226 true chr2: 33979406-33991631 Medicago truncatula
Medtr2g081080 1.0kb upstream 1.0kb upstream 1000 false chr2: 33979406-33980405 Medicago truncatula
Medtr2g081080 1.0kb downstream 1.0kb downstream 12226 true chr2: 33980406-33992631 Medicago truncatula
Medtr2g081080 1.0kb downstream 1.0kb downstream 1000 false chr2: 33991632-33992631 Medicago truncatula
Medtr2g081080 2.0kb upstream 2.0kb upstream 13226 true chr2: 33978406-33991631 Medicago truncatula
Medtr2g081080 2.0kb upstream 2.0kb upstream 2000 false chr2: 33978406-33980405 Medicago truncatula
Medtr2g081080 2.0kb downstream 2.0kb downstream 13226 true chr2: 33980406-33993631 Medicago truncatula
Medtr2g081080 2.0kb downstream 2.0kb downstream 2000 false chr2: 33991632-33993631 Medicago truncatula
Medtr2g081080 5.0kb upstream 5.0kb upstream 16226 true chr2: 33975406-33991631 Medicago truncatula
Medtr2g081080 5.0kb upstream 5.0kb upstream 5000 false chr2: 33975406-33980405 Medicago truncatula
Medtr2g081080 5.0kb downstream 5.0kb downstream 16226 true chr2: 33980406-33996631 Medicago truncatula
Medtr2g081080 5.0kb downstream 5.0kb downstream 5000 false chr2: 33991632-33996631 Medicago truncatula
Medtr2g081080 10.0kb upstream 10.0kb upstream 21226 true chr2: 33970406-33991631 Medicago truncatula
Medtr2g081080 10.0kb upstream 10.0kb upstream 10000 false chr2: 33970406-33980405 Medicago truncatula
Medtr2g081080 10.0kb downstream 10.0kb downstream 21226 true chr2: 33980406-34001631 Medicago truncatula
Medtr2g081080 10.0kb downstream 10.0kb downstream 10000 false chr2: 33991632-34001631 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303844 5265 Fabidae View MSA
124061255 5270 Rosid View MSA
123740786 5271 Pentapetalae View MSA
122786352 5272 Eudicot View MSA
122042207 5273 Angiosperm View MSA
121344508 5274 Embryophyte View MSA
123424204 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.257        
cufflinks 1.159        
cufflinks 1.65        
cufflinks 0.576       Low
cufflinks 1.79       High
cufflinks 0.335       Low
cufflinks 0.995        
cufflinks 1.296        
cufflinks 1.105        

0 Strain