Gene : Medtr2g080950 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23180:SF160 - PROTEIN W09D10.1 Description:  ARF GTPase activator
Genomic Order:  4233 Name:  ? Medtr2g080950
Secondary Identifier:  ? PAC:31062660
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g080950 0.5kb upstream 0.5kb upstream 6217 true chr2: 33912919-33919135 Medicago truncatula
Medtr2g080950 0.5kb upstream 0.5kb upstream 500 false chr2: 33912919-33913418 Medicago truncatula
Medtr2g080950 0.5kb downstream 0.5kb downstream 6217 true chr2: 33913419-33919635 Medicago truncatula
Medtr2g080950 0.5kb downstream 0.5kb downstream 500 false chr2: 33919136-33919635 Medicago truncatula
Medtr2g080950 1.0kb upstream 1.0kb upstream 6717 true chr2: 33912419-33919135 Medicago truncatula
Medtr2g080950 1.0kb upstream 1.0kb upstream 1000 false chr2: 33912419-33913418 Medicago truncatula
Medtr2g080950 1.0kb downstream 1.0kb downstream 6717 true chr2: 33913419-33920135 Medicago truncatula
Medtr2g080950 1.0kb downstream 1.0kb downstream 1000 false chr2: 33919136-33920135 Medicago truncatula
Medtr2g080950 2.0kb upstream 2.0kb upstream 7717 true chr2: 33911419-33919135 Medicago truncatula
Medtr2g080950 2.0kb upstream 2.0kb upstream 2000 false chr2: 33911419-33913418 Medicago truncatula
Medtr2g080950 2.0kb downstream 2.0kb downstream 7717 true chr2: 33913419-33921135 Medicago truncatula
Medtr2g080950 2.0kb downstream 2.0kb downstream 2000 false chr2: 33919136-33921135 Medicago truncatula
Medtr2g080950 5.0kb upstream 5.0kb upstream 10717 true chr2: 33908419-33919135 Medicago truncatula
Medtr2g080950 5.0kb upstream 5.0kb upstream 5000 false chr2: 33908419-33913418 Medicago truncatula
Medtr2g080950 5.0kb downstream 5.0kb downstream 10717 true chr2: 33913419-33924135 Medicago truncatula
Medtr2g080950 5.0kb downstream 5.0kb downstream 5000 false chr2: 33919136-33924135 Medicago truncatula
Medtr2g080950 10.0kb upstream 10.0kb upstream 15717 true chr2: 33903419-33919135 Medicago truncatula
Medtr2g080950 10.0kb upstream 10.0kb upstream 10000 false chr2: 33903419-33913418 Medicago truncatula
Medtr2g080950 10.0kb downstream 10.0kb downstream 15717 true chr2: 33913419-33929135 Medicago truncatula
Medtr2g080950 10.0kb downstream 10.0kb downstream 10000 false chr2: 33919136-33929135 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310661 5265 Fabidae View MSA
124068745 5270 Rosid View MSA
123743819 5271 Pentapetalae View MSA
122788414 5272 Eudicot View MSA
122045420 5273 Angiosperm View MSA
121346891 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.026        
cufflinks 3.148        
cufflinks 4.841        
cufflinks 5.952       High
cufflinks 2.357       Low
cufflinks 3.915        
cufflinks 3.806        
cufflinks 3.598        
cufflinks 5.607       High

0 Strain