Gene : Medtr2g080290 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  4231
Name:  ? Medtr2g080290 Secondary Identifier:  ? PAC:31069265
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g080290 0.5kb upstream 0.5kb upstream 4945 true chr2: 33894169-33899113 Medicago truncatula
Medtr2g080290 0.5kb upstream 0.5kb upstream 500 false chr2: 33898614-33899113 Medicago truncatula
Medtr2g080290 0.5kb downstream 0.5kb downstream 4945 true chr2: 33893669-33898613 Medicago truncatula
Medtr2g080290 0.5kb downstream 0.5kb downstream 500 false chr2: 33893669-33894168 Medicago truncatula
Medtr2g080290 1.0kb upstream 1.0kb upstream 5445 true chr2: 33894169-33899613 Medicago truncatula
Medtr2g080290 1.0kb upstream 1.0kb upstream 1000 false chr2: 33898614-33899613 Medicago truncatula
Medtr2g080290 1.0kb downstream 1.0kb downstream 5445 true chr2: 33893169-33898613 Medicago truncatula
Medtr2g080290 1.0kb downstream 1.0kb downstream 1000 false chr2: 33893169-33894168 Medicago truncatula
Medtr2g080290 2.0kb upstream 2.0kb upstream 6445 true chr2: 33894169-33900613 Medicago truncatula
Medtr2g080290 2.0kb upstream 2.0kb upstream 2000 false chr2: 33898614-33900613 Medicago truncatula
Medtr2g080290 2.0kb downstream 2.0kb downstream 6445 true chr2: 33892169-33898613 Medicago truncatula
Medtr2g080290 2.0kb downstream 2.0kb downstream 2000 false chr2: 33892169-33894168 Medicago truncatula
Medtr2g080290 5.0kb upstream 5.0kb upstream 9445 true chr2: 33894169-33903613 Medicago truncatula
Medtr2g080290 5.0kb upstream 5.0kb upstream 5000 false chr2: 33898614-33903613 Medicago truncatula
Medtr2g080290 5.0kb downstream 5.0kb downstream 9445 true chr2: 33889169-33898613 Medicago truncatula
Medtr2g080290 5.0kb downstream 5.0kb downstream 5000 false chr2: 33889169-33894168 Medicago truncatula
Medtr2g080290 10.0kb upstream 10.0kb upstream 14445 true chr2: 33894169-33908613 Medicago truncatula
Medtr2g080290 10.0kb upstream 10.0kb upstream 10000 false chr2: 33898614-33908613 Medicago truncatula
Medtr2g080290 10.0kb downstream 10.0kb downstream 14445 true chr2: 33884169-33898613 Medicago truncatula
Medtr2g080290 10.0kb downstream 10.0kb downstream 10000 false chr2: 33884169-33894168 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026569 5273 Angiosperm View MSA
122305209 5265 Fabidae View MSA
124068648 5270 Rosid View MSA
123737361 5271 Pentapetalae View MSA
122787505 5272 Eudicot View MSA
121346069 5274 Embryophyte View MSA
123380318 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.338        
cufflinks 5.551       High
cufflinks 4.739        
cufflinks 0.32       Low
cufflinks 5.519       High
cufflinks 0.342       Low
cufflinks 0.724        
cufflinks 5.729       High
cufflinks 0.264       Low

0 Strain